RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 UBOX5O94941 541 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 NDUFA7O95182 113 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 TSPAN15O95858 294 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 PATE4P0C8F1 98 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 NR2F1P10589 423 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 PRG2P13727 222 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 GRPRP30550 384 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 ARRB2P32121 409 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 EGR4Q05215 589 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 CKAP4Q07065 602 aaKnown RBP12.62□□□□□ -0.39
HDAC6-224ENST00000481929 PCLAFQ15004 111 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 FAM69AQ5T7M9 428 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 FIP1L1Q6UN15 594 aaKnown RBP12.62□□□□□ -0.39
HDAC6-224ENST00000481929 H1FNTQ75WM6 255 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-224ENST00000481929 VRK2Q86Y07 508 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 PAQR4Q8N4S7 273 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-224ENST00000481929 DIRC2Q96SL1 478 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 BCL2L14Q9BZR8 327 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 EGLN1Q9GZT9 426 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 NOP53Q9NZM5 478 aaKnown RBP12.62□□□□□ -0.39
HDAC6-224ENST00000481929 C1RLQ9NZP8 487 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 GPR45Q9Y5Y3 372 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 SOX21Q9Y651 276 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-224ENST00000481929 C3orf80F5H4A9 247 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 COPEO14579 308 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 RIPK2O43353 540 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 SPRY3O43610 288 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 NPHS1O60500 1241 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 IGHV1-46P01743 117 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 CCL2P13500 99 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 SELEP16581 610 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 KRTAP10-3P60369 221 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 TXNL4AP83876 142 aaKnown RBP12.61□□□□□ -0.39
HDAC6-224ENST00000481929 PMS2P3Q13401 168 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 HLXQ14774 488 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-224ENST00000481929 Q6ZPA2 131 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 PIWIL3Q7Z3Z3 882 aaKnown RBP12.61□□□□□ -0.39
HDAC6-224ENST00000481929 SKA3Q8IX90 412 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 KLHL36Q8N4N3 616 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 SPICQ8N5J4 248 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 ADPRHL1Q8NDY3 354 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 OR52P1PQ8NH57 321 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 FGFBP3Q8TAT2 258 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 FAM110DQ8TAY7 271 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-224ENST00000481929 ZDHHC16Q969W1 377 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 SLC30A2Q9BRI3 323 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 C1orf198Q9H425 327 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 PATZ1Q9HBE1 687 aaKnown RBP12.61□□□□□ -0.39
HDAC6-224ENST00000481929 NPHS2Q9NP85 383 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 TNFRSF19Q9NS68 423 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 OR5V1Q9UGF6 321 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 NPTNQ9Y639 398 aa12.61□□□□□ -0.39
HDAC6-224ENST00000481929 PLSCR5A0PG75 271 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 ZNF726A6NNF4 738 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 A8MXK9 166 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 SRRM5B3KS81 715 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 TM9SF1O15321 606 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 ZNF500O60304 480 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-224ENST00000481929 ENTPD5O75356 428 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 SNAP29O95721 258 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 PLATP00750 562 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 IGHV3-13P01766 116 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 IGHV2-70P01814 119 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 C1QCP02747 245 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 SBK2P0C263 348 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 PPIAL4GP0DN37 164 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 HLA-DOBP13765 273 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 NQO1P15559 274 aaKnown RBP12.6□□□□□ -0.39
HDAC6-224ENST00000481929 UCP2P55851 309 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 SEC61A1P61619 476 aaKnown RBP12.6□□□□□ -0.39
HDAC6-224ENST00000481929 RELBQ01201 579 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 EMX2Q04743 252 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 PDCD1Q15116 288 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 TBC1D28Q2M2D7 210 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 RNF220Q5VTB9 566 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 FAM205BPQ63HN1 556 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 C5orf46Q6UWT4 87 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 TRMT10CQ7L0Y3 403 aaKnown RBP12.6□□□□□ -0.39
HDAC6-224ENST00000481929 MIER2Q8N344 545 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 SLC38A4Q969I6 547 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 TAAR8Q969N4 342 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 ASIC5Q9NY37 505 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 EGFL7Q9UHF1 273 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 ZNF443Q9Y2A4 671 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-224ENST00000481929 RNF114Q9Y508 228 aa12.6□□□□□ -0.39
HDAC6-224ENST00000481929 TRAV40A0A0B4J280 105 aa12.59□□□□□ -0.39
HDAC6-224ENST00000481929 HPRP00739 348 aa12.59□□□□□ -0.39
HDAC6-224ENST00000481929 PTHP01270 115 aa12.59□□□□□ -0.39
HDAC6-224ENST00000481929 CBLP22681 906 aa12.59□□□□□ -0.39
HDAC6-224ENST00000481929 SLC6A9P48067 706 aa12.59□□□□□ -0.39
HDAC6-224ENST00000481929 CSNK1A1P48729 337 aa12.59□□□□□ -0.39
HDAC6-224ENST00000481929 PAX8Q06710 450 aa12.59□□□□□ -0.39
HDAC6-224ENST00000481929 CASP8Q14790 479 aa12.59□□□□□ -0.39
HDAC6-224ENST00000481929 LARS2Q15031 903 aaKnown RBP12.59□□□□□ -0.39
HDAC6-224ENST00000481929 BEAN1Q3B7T3 259 aa12.59□□□□□ -0.39
HDAC6-224ENST00000481929 ESCO2Q56NI9 601 aa12.59□□□□□ -0.39
HDAC6-224ENST00000481929 TMEM53Q6P2H8 277 aa12.59□□□□□ -0.39
HDAC6-224ENST00000481929 NET1Q7Z628 596 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-224ENST00000481929 SERPINA11Q86U17 422 aa12.59□□□□□ -0.39
HDAC6-224ENST00000481929 LRRC34Q8IZ02 419 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms