RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 ALKBH6Q3KRA9 238 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 C3orf36Q3SXR2 165 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 SLC36A2Q495M3 483 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 PAGE3Q5JUK9 113 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 BEND6Q5SZJ8 279 aaPredicted RBP6.13□□□□□ -1.43
COL17A1-205ENST00000480127 AP1ARQ63HQ0 302 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 ZNF613Q6PF04 617 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 UNQ6126/PRO20091Q6UXV3 157 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 RINLQ6ZS11 566 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 SLC35D2Q76EJ3 337 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 SLC16A14Q7RTX9 510 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 HDXQ7Z353 690 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 ZCCHC24Q8N2G6 241 aaKnown RBP6.13□□□□□ -1.43
COL17A1-205ENST00000480127 LSMEM1Q8N8F7 131 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 RBM15BQ8NDT2 890 aaKnown RBP6.13□□□□□ -1.43
COL17A1-205ENST00000480127 ADPRHL1Q8NDY3 354 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 NUP37Q8NFH4 326 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 OR1J2Q8NGS2 313 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 OR5J2Q8NH18 312 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 UBASH3BQ8TF42 649 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 LZICQ8WZA0 190 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 FOXB1Q99853 325 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 TMEM43Q9BTV4 400 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 PTDSS2Q9BVG9 487 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 NDEL1Q9GZM8 345 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 MS4A5Q9H3V2 200 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 TMEM38AQ9H6F2 299 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 ZNF442Q9H7R0 627 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 LPAR2Q9HBW0 351 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 NOX3Q9HBY0 568 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 CCNB1IP1Q9NPC3 277 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 DECR2Q9NUI1 292 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 MRGBPQ9NV56 204 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 MRPL39Q9NYK5 338 aaKnown RBP6.13□□□□□ -1.43
COL17A1-205ENST00000480127 SLC25A37Q9NYZ2 338 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 VAPAQ9P0L0 249 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 SLAMF8Q9P0V8 285 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 SLC7A7Q9UM01 511 aa6.13□□□□□ -1.43
COL17A1-205ENST00000480127 A0A0B4J2E0 115 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 A0A1B0GX12 115 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 PLSCR5A0PG75 271 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 SLC22A23A1A5C7 686 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 FTCDNL1E5RQL4 147 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 LRRN3E7EW58 273 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 PLPP3O14495 311 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 TRAF3IP2O43734 574 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-205ENST00000480127 CHP2O43745 196 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 TPST1O60507 370 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 NPIPB7O75200 414 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 VENTXO95231 258 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 IGKV3-15P01624 115 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 FAM157BP0CG42 384 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 OR8G3PP0DMU2 310 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 BMP2P12643 396 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 NR2C1P13056 603 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 HLA-DOBP13765 273 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 NR4A1P22736 598 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 RAD52P43351 418 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 ALDH3B1P43353 468 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 DAP3P51398 398 aaKnown RBP6.12□□□□□ -1.43
COL17A1-205ENST00000480127 KLF3P57682 345 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-205ENST00000480127 EGR4Q05215 589 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 TOP3AQ13472 1001 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-205ENST00000480127 MELKQ14680 651 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 RAB39AQ14964 217 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 MAPRE2Q15555 327 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 EFNB3Q15768 340 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 NPTX1Q15818 432 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 MOGQ16653 247 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 LRRC23Q53EV4 343 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-205ENST00000480127 HSP90B2PQ58FF3 399 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 ENTPD8Q5MY95 495 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 LRIF1Q5T3J3 769 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 RGS7BPQ6MZT1 257 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-205ENST00000480127 C6orf89Q6UWU4 347 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 LINGO2Q7L985 606 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 RRM2BQ7LG56 351 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 PIWIL3Q7Z3Z3 882 aaKnown RBP6.12□□□□□ -1.43
COL17A1-205ENST00000480127 PXKQ7Z7A4 578 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 GLCCI1Q86VQ1 547 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 TREML1Q86YW5 311 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 C20orf196Q8IYI0 205 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 CDK20Q8IZL9 346 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 LRRC18Q8N456 261 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 LINC01356Q8N9X3 169 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 SYT14Q8NB59 555 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 SLC30A7Q8NEW0 376 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 OR6S1Q8NH40 331 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 OR10A6Q8NH74 314 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 ADAMTS16Q8TE57 1224 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 C11orf40Q8WZ69 217 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 MS4A3Q96HJ5 214 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 TXNDC15Q96J42 360 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 TPD52L3Q96J77 140 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 MPP4Q96JB8 637 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 LRR1Q96L50 414 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 MOGAT1Q96PD6 335 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 CGREF1Q99674 301 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 SIKE1Q9BRV8 207 aa6.12□□□□□ -1.43
COL17A1-205ENST00000480127 DENND2DQ9H6A0 471 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms