RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 GGT1P19440 569 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 PTAFRP25105 342 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 SLC9A3P48764 834 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 RPS4XP62701 263 aaKnown RBP4.3□□□□□ -1.72
PTCD3-213ENST00000480102 PUDPQ08623 228 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 BNIP2Q12982 314 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 SELPLGQ14242 412 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 OR1Q1Q15612 314 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 TAB1Q15750 504 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 GABRA6Q16445 453 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 RNF151Q2KHN1 245 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 NDUFAF6Q330K2 333 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 NCMAPQ5T1S8 102 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 OTUD3Q5T2D3 398 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-213ENST00000480102 TMEM225Q6GV28 225 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 C16orf89Q6UX73 402 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 TMEM108Q6UXF1 575 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 PIWIL3Q7Z3Z3 882 aaKnown RBP4.3□□□□□ -1.72
PTCD3-213ENST00000480102 CPLX4Q7Z7G2 160 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 LUZP2Q86TE4 346 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 CDC20BQ86Y33 519 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 EPHX4Q8IUS5 362 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 TMEM123Q8N131 208 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF433Q8N7K0 673 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-213ENST00000480102 PIK3C3Q8NEB9 887 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 OR9K2Q8NGE7 335 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 OR5M1Q8NGP8 315 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 OR5J2Q8NH18 312 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 OR6X1Q8NH79 312 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 ADAMTS16Q8TE57 1224 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 GEMIN6Q8WXD5 167 aaKnown RBP4.3□□□□□ -1.72
PTCD3-213ENST00000480102 FOXRED1Q96CU9 486 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-213ENST00000480102 MUCL1Q96DR8 90 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 PRRC1Q96M27 445 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 WFIKKN1Q96NZ8 548 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 FOXB1Q99853 325 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 MED18Q9BUE0 208 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 ACTR6Q9GZN1 396 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 OPN3Q9H1Y3 402 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-213ENST00000480102 SLCO5A1Q9H2Y9 848 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 TMEM185BQ9H7F4 350 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 DCAF13Q9NV06 445 aaKnown RBP4.3□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF701Q9NV72 531 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-213ENST00000480102 ADPRHL2Q9NX46 363 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 CMTM6Q9NX76 183 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 CD300AQ9UGN4 299 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 MAGEL2Q9UJ55 1249 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 CDC42EP3Q9UKI2 254 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 AMDHD2Q9Y303 409 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 PDZD2O15018 2839 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 DIDO1Q9BTC0 2240 aaKnown RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF407Q9C0G0 2248 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 LOC100653049A0A140TA62 436 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF99A8MXY4 864 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 CXCR6O00574 342 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 NME4O00746 187 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 PLPP3O14495 311 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 TRAF3IP2O43734 574 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 KRT34O76011 436 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 KRT36O76013 467 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 IGKV3-15P01624 115 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 IGLV1-44P01699 117 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 IGHMP01871 453 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 BGLAPP02818 100 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 THY1P04216 161 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 IFNW1P05000 195 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 GKN3PP0CG01 181 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 RHCEP18577 417 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 CALB2P22676 271 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 IGHV1-2P23083 117 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 TUBG1P23258 451 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 IL32P24001 234 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 APEX1P27695 318 aaKnown RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 CPOXP36551 454 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 MAGEA2P43356 314 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 GSK3BP49841 420 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 SELENOPP49908 381 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 DAP3P51398 398 aaKnown RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 HMGA2P52926 109 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 SEC24CP53992 1094 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 CDH12P55289 794 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 OR2B6P58173 313 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 SMIM11AP58511 58 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 PRPS1P60891 318 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 LIPEQ05469 1076 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 CEACAM7Q14002 265 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 CAPRIN1Q14444 709 aaKnown RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 OR7A5Q15622 319 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 ACKR1Q16570 336 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF74Q16587 644 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 HIST3H3Q16695 136 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 GLIPR1L2Q4G1C9 344 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 IQCCQ4KMZ1 466 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 CYBRD1Q53TN4 286 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 ENTPD8Q5MY95 495 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 SHEQ5VZ18 495 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF544Q6NX49 715 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 ANKRD16Q6P6B7 361 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 KLHL17Q6TDP4 642 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 TMPRSS11FQ6ZWK6 438 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms