RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 SELENOFO60613 162 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 RGS9O75916 674 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 NEURL1O76050 574 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 AKR7A3O95154 331 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 PLGP00747 810 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 IFNGR1P15260 489 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 CELP19835 753 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 PTGS2P35354 604 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 NAA10P41227 235 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 DNASE1L1P49184 302 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 B3GALT5-AS1P59052 145 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 RPS3AP61247 264 aaKnown RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 RPS25P62851 125 aaKnown RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 H3F3AP84243 136 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 POU3F1Q03052 451 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 GLO1Q04760 184 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 FOXO1Q12778 655 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 DCTN2Q13561 401 aaKnown RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 ZNF829Q3KNS6 432 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 TMEM176BQ3YBM2 270 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 ZNF684Q5T5D7 378 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 DMKNQ6E0U4 476 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 RPL22L1Q6P5R6 122 aaKnown RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 CROCCP3Q8IVE0 287 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 MS4A15Q8N5U1 240 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 ZNF454Q8N9F8 522 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 OR51L1Q8NGJ5 315 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 OR6Q1Q8NGQ2 317 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 OR6X1Q8NH79 312 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 MCFD2Q8NI22 146 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 RPS4Y2Q8TD47 263 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 ASB17Q8WXJ9 295 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 JSRP1Q96MG2 331 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 UBL7Q96S82 380 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 MFRPQ9BY79 579 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 WDR12Q9GZL7 423 aaKnown RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 NUAK2Q9H093 628 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 SRA1Q9HD15 236 aaKnown RBP9.87□□□□□ -0.83
VTI1A-204ENST00000480057 B4GALT7Q9UBV7 327 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 ST6GALNAC2Q9UJ37 374 aa9.87□□□□□ -0.83
VTI1A-204ENST00000480057 KNTC1P50748 2209 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 A0A0G2JMM0 328 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 A0A1W2PPB8 328 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 A0A1W2PRS3 328 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 KIR3DP1A8MWS1 328 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 H7C1C5 153 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 J3QLW9 94 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 DCTN6O00399 190 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 TRAF3IP2O43734 574 aaPredicted RBP9.86□□□□□ -0.83
VTI1A-204ENST00000480057 GPRIN2O60269 458 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 SLC16A7O60669 478 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 KHDRBS3O75525 346 aaKnown RBP9.86□□□□□ -0.83
VTI1A-204ENST00000480057 SERPINA3P01011 423 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 HRGP04196 525 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 HLA-DOBP13765 273 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 ZNF19P17023 458 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 ALOX5APP20292 161 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 SHC1P29353 583 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 RORCP51449 518 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 AGFG1P52594 562 aaKnown RBP9.86□□□□□ -0.83
VTI1A-204ENST00000480057 OR12D2P58182 307 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 LCN6P62502 163 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 SIRPAP78324 504 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 FABP5Q01469 135 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 MFAP5Q13361 173 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 MELKQ14680 651 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 OR1C1Q15619 314 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 HYAL4Q2M3T9 481 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 TBC1D25Q3MII6 688 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 SOWAHCQ53LP3 525 aaPredicted RBP9.86□□□□□ -0.83
VTI1A-204ENST00000480057 TEX30Q5JUR7 227 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 THEM4Q5T1C6 240 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 AGAP7PQ5VUJ5 663 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 VASNQ6EMK4 673 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 TMEM225Q6GV28 225 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 PAMR1Q6UXH9 720 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 ESPNLQ6ZVH7 1005 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 TRILQ7L0X0 811 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 SSX6Q7RTT6 188 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 FAM220AQ7Z4H9 259 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 GHDCQ8N2G8 530 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 GALNT16Q8N428 558 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 TEX19Q8NA77 164 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 ZNF511Q8NB15 262 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 OR2M7Q8NG81 312 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 OR5M1Q8NGP8 315 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 PHYHIPQ92561 330 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 BORCS5Q969J3 196 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 PELI1Q96FA3 418 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 AGAP4Q96P64 663 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 TSSK2Q96PF2 358 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 SF3B5Q9BWJ5 86 aaKnown RBP9.86□□□□□ -0.83
VTI1A-204ENST00000480057 CDADC1Q9BWV3 514 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 MRPL13Q9BYD1 178 aaKnown RBP9.86□□□□□ -0.83
VTI1A-204ENST00000480057 HMG20AQ9NP66 347 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 DEPPQ9NTK1 212 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 ANKRD10Q9NXR5 420 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 QPCTLQ9NXS2 382 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 KLHL9Q9P2J3 617 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 CRNNQ9UBG3 495 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms