RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 PUDPQ08623 228 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 PMS2P3Q13401 168 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 ZNF239Q16600 458 aaKnown RBP5.94□□□□□ -1.46
USP48-208ENST00000479177 LINC00303Q3SY05 128 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 ALG10Q5BKT4 473 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 LAIR2Q6ISS4 152 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 RPUSD3Q6P087 351 aaKnown RBP5.94□□□□□ -1.46
USP48-208ENST00000479177 ARHGAP11AQ6P4F7 1023 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 DPY19L2P2Q6ZN68 376 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 TMPPEQ6ZT21 453 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 ESPNLQ6ZVH7 1005 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 ASB18Q6ZVZ8 466 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 H1FNTQ75WM6 255 aaPredicted RBP5.94□□□□□ -1.46
USP48-208ENST00000479177 HIST3H2AQ7L7L0 130 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 IGFN1Q86VF2 1251 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 RHOXF1Q8NHV9 184 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 C9orf43Q8TAL5 461 aaPredicted RBP5.94□□□□□ -1.46
USP48-208ENST00000479177 NEIL3Q8TAT5 605 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 CNIH3Q8TBE1 160 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 APH1BQ8WW43 257 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 HIST1H2ACQ93077 130 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 SLC38A2Q96QD8 506 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 TSPAN32Q96QS1 320 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 NR1H4Q96RI1 486 aaPredicted RBP5.94□□□□□ -1.46
USP48-208ENST00000479177 TAAR6Q96RI8 345 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 KATNB1Q9BVA0 655 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 POLDIP3Q9BY77 421 aaKnown RBP5.94□□□□□ -1.46
USP48-208ENST00000479177 SRXN1Q9BYN0 137 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 ZCCHC4Q9H5U6 513 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 PRORYQ9H606 182 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 NRIP3Q9NQ35 241 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 CMC2Q9NRP2 79 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 TAS2R5Q9NYW4 299 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 BAIAP2Q9UQB8 552 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 TRAPPC4Q9Y296 219 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 B3GNT3Q9Y2A9 372 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 B3GALT5Q9Y2C3 310 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 TRBV23-1A0A0A0MS06 115 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 TRGV5A0A0B4J1U4 118 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 TEX13CA0A0J9YWL9 993 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 A0A1B0GVC2 190 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 NPIPB13A6NJU9 1138 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 AQP7P3A6NL99 342 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 RIIAD1A6NNX1 92 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 ZNF814B7Z6K7 855 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 NPIPB4C9JG80 1138 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 C11orf98E9PRG8 122 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 BLOC1S5-TXNDC5H3BN57 136 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 SULT2B1O00204 365 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 SLC1A7O00341 560 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 TNFSF11O14788 317 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 ARPC3O15145 178 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 SMAD9O15198 467 aaKnown RBP5.93□□□□□ -1.46
USP48-208ENST00000479177 MPZL2O60487 215 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 AKR7A3O95154 331 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 SLC2A10O95528 541 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 ACTL6AO96019 429 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 HMGN1P05114 100 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 CD14P08571 375 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 ADORA3P0DMS8 318 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 ZNF708P17019 499 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 KLK2P20151 261 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 FMO3P31513 532 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 RPL4P36578 427 aaKnown RBP5.93□□□□□ -1.46
USP48-208ENST00000479177 STARP49675 285 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 AGFG1P52594 562 aaKnown RBP5.93□□□□□ -1.46
USP48-208ENST00000479177 CHN2P52757 468 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 SUCLG1P53597 346 aaKnown RBP5.93□□□□□ -1.46
USP48-208ENST00000479177 CLDN15P56746 228 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 CTXN1P60606 82 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 ERVK-25P63136 954 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 CSNK2A1P68400 391 aaPredicted RBP5.93□□□□□ -1.46
USP48-208ENST00000479177 H3F3AP84243 136 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 EFNB1P98172 346 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 ZP4Q12836 540 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 TOP3AQ13472 1001 aaPredicted RBP5.93□□□□□ -1.46
USP48-208ENST00000479177 KRR1Q13601 381 aaKnown RBP5.93□□□□□ -1.46
USP48-208ENST00000479177 SLC10A1Q14973 349 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 SNAPC1Q16533 368 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 KCTD21Q4G0X4 260 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 SLC25A30Q5SVS4 291 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 C6orf141Q5SZD1 244 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 HBMQ6B0K9 141 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 ABLIM2Q6H8Q1 611 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 PAQR6Q6TCH4 344 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 CASP12Q6UXS9 341 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 FAM122BQ7Z309 247 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 ZNF786Q8N393 782 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 TMEM99Q8N816 258 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 TCEANCQ8N8B7 351 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 LSM14AQ8ND56 463 aaKnown RBP5.93□□□□□ -1.46
USP48-208ENST00000479177 OR8J1Q8NGP2 316 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 OR10D3Q8NH80 312 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 OR2V1Q8NHB1 315 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 ZNF519Q8TB69 540 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 TMEM163Q8TC26 289 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 TRUB1Q8WWH5 349 aaKnown RBP5.93□□□□□ -1.46
USP48-208ENST00000479177 HDAC2Q92769 488 aaKnown RBP5.93□□□□□ -1.46
USP48-208ENST00000479177 ABTB1Q969K4 478 aaPredicted RBP5.93□□□□□ -1.46
USP48-208ENST00000479177 ZNF566Q969W8 418 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms