RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 DCNP07585 359 aaKnown RBP19.37■□□□□ 0.69
SDF4-206ENST00000478938 NDUFS1P28331 727 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 KCNAB1Q14722 419 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 MEF2DQ14814 521 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 GFI1BQ5VTD9 330 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 NKAIN2Q5VXU1 208 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 RPL22L1Q6P5R6 122 aaKnown RBP19.37■□□□□ 0.69
SDF4-206ENST00000478938 GABRG1Q8N1C3 465 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 GALNT16Q8N428 558 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 PFN4Q8NHR9 129 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 ZNF480Q8WV37 535 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 TCTN2Q96GX1 697 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 SMIM8Q96KF7 97 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 ASB16Q96NS5 453 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 KATNBL1Q9H079 304 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 ATG5Q9H1Y0 275 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 KCNK15Q9H427 330 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 C20orf141Q9NUB4 165 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 ZNF726A6NNF4 738 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 CATP04040 527 aaKnown RBP19.37■□□□□ 0.69
SDF4-206ENST00000478938 ITGA5P08648 1049 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 EDN3P14138 238 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 SULT1A1P50225 295 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 NAAAQ02083 359 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 TMPPEQ6ZT21 453 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 C11orf96Q7Z7L8 435 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 GJD3Q8N144 294 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 KDF1Q8NAX2 398 aaPredicted RBP19.37■□□□□ 0.69
SDF4-206ENST00000478938 FOXRED1Q96CU9 486 aaPredicted RBP19.37■□□□□ 0.69
SDF4-206ENST00000478938 EFCAB11Q9BUY7 163 aa19.37■□□□□ 0.69
SDF4-206ENST00000478938 SLCO2B1O94956 709 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 SERPINA5P05154 406 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 CTSLP07711 333 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 BMP7P18075 431 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 RPS10P46783 165 aaKnown RBP19.36■□□□□ 0.69
SDF4-206ENST00000478938 KHKP50053 298 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 OR2A2Q6IF42 318 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 STAC2Q6ZMT1 411 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 MAFIPQ8WZ33 124 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 C16orf58Q96GQ5 468 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 KRCC1Q9NPI7 259 aaPredicted RBP19.36■□□□□ 0.69
SDF4-206ENST00000478938 SIDT1Q9NXL6 827 aaKnown RBP19.36■□□□□ 0.69
SDF4-206ENST00000478938 DYRK1BQ9Y463 629 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 OR52A4PA6NMU1 304 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 F10P00742 488 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 AMY2AP04746 511 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 IRF1P10914 325 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 SNRPNP63162 240 aaKnown RBP19.36■□□□□ 0.69
SDF4-206ENST00000478938 ZNF585AQ6P3V2 769 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.36■□□□□ 0.69
SDF4-206ENST00000478938 BIVMQ86UB2 503 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 ST7LQ8TDW4 575 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 ZNF350Q9GZX5 532 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 RGCCQ9H4X1 137 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 ETV7Q9Y603 341 aa19.36■□□□□ 0.69
SDF4-206ENST00000478938 LRP3O75074 770 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 GJB5O95377 273 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 RAB3DO95716 219 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 SNAI1O95863 264 aaPredicted RBP19.35■□□□□ 0.69
SDF4-206ENST00000478938 ADRB3P13945 408 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 SOX2P48431 317 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 SPNS3Q6ZMD2 512 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 FRMD1Q8N878 549 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 OR13C2Q8NGS9 318 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 RIIAD1A6NNX1 92 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 NFKBIEO00221 500 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 DCTN6O00399 190 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 ALOX12BO75342 701 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 DVL1P1P54792 670 aaPredicted RBP19.35■□□□□ 0.69
SDF4-206ENST00000478938 SCGB2B2Q4G0G5 96 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 APOBEC3FQ8IUX4 373 aaKnown RBP19.35■□□□□ 0.69
SDF4-206ENST00000478938 C19orf47Q8N9M1 422 aaKnown RBP19.35■□□□□ 0.69
SDF4-206ENST00000478938 ZSCAN4Q8NAM6 433 aaPredicted RBP19.35■□□□□ 0.69
SDF4-206ENST00000478938 OR5K2Q8NHB8 316 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 ADAMTS17Q8TE56 1095 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 CD180Q99467 661 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 GPR61Q9BZJ8 451 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 ADAM18Q9Y3Q7 739 aa19.35■□□□□ 0.69
SDF4-206ENST00000478938 MSGN1A6NI15 193 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 BRINP1O60477 761 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 CSN2P05814 226 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 OR8U9P0C7N5 309 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 EXOSC6Q5RKV6 272 aaKnown RBP19.34■□□□□ 0.69
SDF4-206ENST00000478938 KCTD9Q7L273 389 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 C1QL4Q86Z23 238 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 OR8U1Q8NH10 309 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 RELTQ969Z4 430 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 SEPT5Q99719 369 aaPredicted RBP19.34■□□□□ 0.69
SDF4-206ENST00000478938 RAB33BQ9H082 229 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 GLIPR2Q9H4G4 154 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 F3P13726 295 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 CORO1AP31146 461 aaKnown RBP19.34■□□□□ 0.69
SDF4-206ENST00000478938 FOXO1Q12778 655 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 DUSP28Q4G0W2 176 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 KLHDC8AQ8IYD2 350 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 OR6X1Q8NH79 312 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 GPR148Q8TDV2 347 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 OR8D1Q8WZ84 308 aa19.34■□□□□ 0.69
SDF4-206ENST00000478938 SAT2Q96F10 170 aaPredicted RBP19.34■□□□□ 0.69
SDF4-206ENST00000478938 GPR174Q9BXC1 333 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms