RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 GNGT2O14610 69 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 CIB2O75838 187 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 CST1P01037 141 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 IGHG1P01857 330 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 HRGP04196 525 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 PGA4P0DJD7 388 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 PGA3P0DJD8 388 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 B4GALT1P15291 398 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 LIMS1P48059 325 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 ZNF83P51522 516 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 CTXN1P60606 82 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 ERVK-25P63136 954 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 TUBA1BP68363 451 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 TUBA4AP68366 448 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 ARF1P84077 181 aaKnown RBP6.05□□□□□ -1.44
BRCA1-215ENST00000478531 RUNX1T1Q06455 604 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 CD47Q08722 323 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 FHL1Q13642 323 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 TAF11Q15544 211 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 ZBED5Q49AG3 693 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 BEX5Q5H9J7 111 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 TIMM23BQ5SRD1 257 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 OR2T5Q6IEZ7 315 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 NHLRC1Q6VVB1 395 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 TMPRSS11FQ6ZWK6 438 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 TUBA1AQ71U36 451 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 HDDC2Q7Z4H3 204 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 CDC20BQ86Y33 519 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 NOXO1Q8NFA2 376 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 OR1K1Q8NGR3 316 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 OR2T29Q8NH02 315 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 OR6X1Q8NH79 312 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 POP5Q969H6 163 aaKnown RBP6.05□□□□□ -1.44
BRCA1-215ENST00000478531 ADAD1Q96M93 576 aaKnown RBP6.05□□□□□ -1.44
BRCA1-215ENST00000478531 HS3ST6Q96QI5 342 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 TSPAN32Q96QS1 320 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 GPA33Q99795 319 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 FUZQ9BT04 418 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 KATNB1Q9BVA0 655 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 CHID1Q9BWS9 393 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 NDEL1Q9GZM8 345 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 REEP1Q9H902 201 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 NPAP1Q9NZP6 1156 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 ADAM18Q9Y3Q7 739 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 SAMHD1Q9Y3Z3 626 aaKnown RBP6.05□□□□□ -1.44
BRCA1-215ENST00000478531 FLNAP21333 2647 aaKnown RBP6.05□□□□□ -1.44
BRCA1-215ENST00000478531 A0A1W2PPR1 153 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 TCRBV3S1A0A5B6 114 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ZNF99A8MXY4 864 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 H7C1C5 153 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 M0R1B8 84 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 KRT36O76013 467 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 CCNB2O95067 398 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 TSPAN19P0C672 248 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ZNF26P17031 533 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ACVR1BP36896 505 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 IFNGR2P38484 337 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 IST1P53990 364 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 SH3BGRP55822 239 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 PRPS1P60891 318 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 UBE2NP61088 152 aaKnown RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 RPL27P61353 136 aaKnown RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 LCN6P62502 163 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 BSPH1Q075Z2 132 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 TBRG1Q3YBR2 411 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 PGBD2Q6P3X8 592 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ZNF813Q6ZN06 617 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ZER1Q7Z7L7 766 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 P2RY8Q86VZ1 359 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 CLDN22Q8N7P3 220 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 C1orf162Q8NEQ5 155 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 HTRA1Q92743 480 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 LRR1Q96L50 414 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 USB1Q9BQ65 265 aaKnown RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 MMADHCQ9H3L0 296 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 TXNIPQ9H3M7 391 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 UBTD1Q9HAC8 227 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 NGBQ9NPG2 151 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 SLC17A5Q9NRA2 495 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 GLTPQ9NZD2 209 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 POFUT2Q9Y2G5 429 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 SLC25A15Q9Y619 301 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ARID1AO14497 2285 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ZNF469Q96JG9 3925 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 RAI1Q7Z5J4 1906 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 TEX13CA0A0J9YWL9 993 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 FAM221AA4D161 298 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 POM121CA8CG34 1229 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 RPL36A-HNRNPH2H7BZ11 118 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 KLF4O43474 513 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 FKBP6O75344 327 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 E2F6O75461 281 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 TRMUO75648 421 aaKnown RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 NDUFB2O95178 105 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 SLC2A10O95528 541 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 WNT11O96014 354 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 PLAUP00749 431 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 CD3EP07766 207 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 QDPRP09417 244 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ACADSP16219 412 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms