RNA–Protein interactions for RNA: ENST00000478449.5

NCKAP1-205, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-205ENST00000478449 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 YRDCQ86U90 279 aaKnown RBP4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 CARM1Q86X55 608 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 DHFR2Q86XF0 187 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 RBM45Q8IUH3 476 aaKnown RBP4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 LACC1Q8IV20 430 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 AQP12AQ8IXF9 295 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 GHDCQ8N2G8 530 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 TMCO5AQ8N6Q1 288 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 OR6T1Q8NGN1 323 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 NEIL3Q8TAT5 605 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 GEMIN6Q8WXD5 167 aaKnown RBP4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 LZICQ8WZA0 190 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 HDAC2Q92769 488 aaKnown RBP4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 PROX1Q92786 737 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 MCUR1Q96AQ8 359 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 MIB2Q96AX9 1013 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 ADGRG7Q96K78 797 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 NSMCE2Q96MF7 247 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 JSRP1Q96MG2 331 aaPredicted RBP4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 NPAS1Q99742 590 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 ZNF559Q9BR84 538 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 PIGQQ9BRB3 760 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 ZNF426Q9BUY5 554 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 TRIM2Q9C040 744 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 POLR2J2Q9GZM3 115 aaKnown RBP4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 POLR2J3Q9H1A7 115 aaKnown RBP4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 AGPAT4Q9NRZ5 378 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 ADPRHL2Q9NX46 363 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 KLHL28Q9NXS3 571 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 SPRR3Q9UBC9 169 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 RPS6KA6Q9UK32 745 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 DKKL1Q9UK85 242 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 ACAD8Q9UKU7 415 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 NPIPA1Q9UND3 350 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 SAMD4AQ9UPU9 718 aaKnown RBP4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 POMPQ9Y244 141 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 SLC9A8Q9Y2E8 581 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 SETXQ7Z333 2677 aaKnown RBP4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 DCHS2Q6V1P9 2916 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 PCNX3Q9H6A9 2034 aa4.62□□□□□ -1.67
NCKAP1-205ENST00000478449 ALPK2Q86TB3 2170 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 IGKV1D-42A0A075B6H8 117 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 TRGV5A0A0B4J1U4 118 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 FFAR1O14842 300 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 ADAMDEC1O15204 470 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 ZNF208O43345 1280 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 CDC40O60508 579 aaKnown RBP eCLIP4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 NPIPB7O75200 414 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 GMNNO75496 209 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 RBMXL2O75526 392 aaKnown RBP4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 TRAPPC6AO75865 159 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 OR5F1O95221 314 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 ZNF682O95780 498 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 ACTL6AO96019 429 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 THY1P04216 161 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 IFNW1P05000 195 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 THRBP10828 461 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 GP1BBP13224 206 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 APEHP13798 732 aaKnown RBP4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 CPN1P15169 458 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 ZNF708P17019 499 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 HOXB6P17509 224 aaKnown RBP4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 IL11P20809 199 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 RYKP34925 604 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 APOBEC1P41238 236 aaKnown RBP4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 IDH2P48735 452 aaKnown RBP4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 CCR4P51679 360 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 POLR2HP52434 150 aaKnown RBP4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 CLDN15P56746 228 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 CLDN18P56856 261 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 COPZ1P61923 177 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 VLDLRP98155 873 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 HSF1Q00613 529 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 CRYZQ08257 329 aaKnown RBP4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 MERTKQ12866 999 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 FOXF2Q12947 444 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 FLOT2Q14254 428 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 MFSD13AQ14CX5 517 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 BCL2A1Q16548 175 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 CTU2Q2VPK5 515 aaKnown RBP4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 IFI44LQ53G44 452 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 RAET1LQ5VY80 246 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 WBP2NLQ6ICG8 309 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 AAGABQ6PD74 315 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 ZNF613Q6PF04 617 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 ENPP6Q6UWR7 440 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 ZNF813Q6ZN06 617 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 Q6ZPB1 254 aaPredicted RBP4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 PLEKHM3Q6ZWE6 761 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 PIWIL3Q7Z3Z3 882 aaKnown RBP4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 GRINAQ7Z429 371 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 RANBP3LQ86VV4 465 aaPredicted RBP4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 OFCC1Q8IZS5 231 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 ST6GALNAC3Q8NDV1 305 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 OR10Q1Q8NGQ4 319 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 OR14L1PQ8NHC6 308 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 DNAJA4Q8WW22 397 aaPredicted RBP4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 TMEM234Q8WY98 164 aa4.61□□□□□ -1.67
NCKAP1-205ENST00000478449 SLC38A4Q969I6 547 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms