RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 PEX2P28328 305 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 ASCL1P50553 236 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 ALDH3A2P51648 485 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 CAMK2DQ13557 499 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 TRIP10Q15642 601 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 FBXW9Q5XUX1 488 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 Q6ZT83 130 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 HDDC2Q7Z4H3 204 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 LUZP2Q86TE4 346 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 LNX2Q8N448 690 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 POMGNT2Q8NAT1 580 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 NOXO1Q8NFA2 376 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 OR52L1Q8NGH7 329 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 MAGEE2Q8TD90 523 aaPredicted RBP17.6■□□□□ 0.41
ACTB-210ENST00000477812 TMEM54Q969K7 222 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 EME1Q96AY2 570 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 RASD2Q96D21 266 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 KCNK17Q96T54 332 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 IFT27Q9BW83 186 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 GABARAPL3Q9BY60 117 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 COL12A1Q99715 3063 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 A6NIZ1 184 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 ZNF726A6NNF4 738 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 IMPA2O14732 288 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 IDH3BO43837 385 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 IGHG1P01857 330 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 EPHA2P29317 976 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 ACVR1BP36896 505 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 PCYT1AP49585 367 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 RPS6KA3P51812 740 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 RAP1BP61224 184 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 RAP1AP62834 184 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 SLC34A1Q06495 639 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 KRR1Q13601 381 aaKnown RBP17.59■□□□□ 0.41
ACTB-210ENST00000477812 OGFRL1Q5TC84 451 aaPredicted RBP17.59■□□□□ 0.41
ACTB-210ENST00000477812 CARD17Q5XLA6 110 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 LPCAT4Q643R3 524 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 ZBTB49Q6ZSB9 765 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 OR2T33Q8NG76 320 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 TEX47Q8TBZ9 253 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 ZNF566Q969W8 418 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 ZNF570Q96NI8 536 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 ERMAPQ96PL5 475 aaPredicted RBP17.59■□□□□ 0.41
ACTB-210ENST00000477812 ALKBH3Q96Q83 286 aaPredicted RBP17.59■□□□□ 0.41
ACTB-210ENST00000477812 GALNT8Q9NY28 637 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 GRHPRQ9UBQ7 328 aa17.59■□□□□ 0.41
ACTB-210ENST00000477812 E9PQ18 207 aa17.58■□□□□ 0.4
ACTB-210ENST00000477812 H3BN98 237 aa17.58■□□□□ 0.4
ACTB-210ENST00000477812 CCKARP32238 428 aa17.58■□□□□ 0.4
ACTB-210ENST00000477812 ZNF133P52736 654 aaPredicted RBP17.58■□□□□ 0.4
ACTB-210ENST00000477812 FOXG1P55316 489 aaPredicted RBP17.58■□□□□ 0.4
ACTB-210ENST00000477812 ESRRGP62508 458 aa17.58■□□□□ 0.4
ACTB-210ENST00000477812 CDK5Q00535 292 aa17.58■□□□□ 0.4
ACTB-210ENST00000477812 PGGHGQ32M88 737 aa17.58■□□□□ 0.4
ACTB-210ENST00000477812 ZNF362Q5T0B9 420 aaPredicted RBP17.58■□□□□ 0.4
ACTB-210ENST00000477812 BEND4Q6ZU67 534 aa17.58■□□□□ 0.4
ACTB-210ENST00000477812 PTCHD4Q6ZW05 846 aa17.58■□□□□ 0.4
ACTB-210ENST00000477812 IQCF1Q8N6M8 205 aa17.58■□□□□ 0.4
ACTB-210ENST00000477812 ALG12Q9BV10 488 aa17.58■□□□□ 0.4
ACTB-210ENST00000477812 SLC25A19Q9HC21 320 aa17.58■□□□□ 0.4
ACTB-210ENST00000477812 KCNJ16Q9NPI9 418 aa17.58■□□□□ 0.4
ACTB-210ENST00000477812 NPDC1Q9NQX5 325 aaPredicted RBP17.58■□□□□ 0.4
ACTB-210ENST00000477812 BAIAP2Q9UQB8 552 aa17.58■□□□□ 0.4
ACTB-210ENST00000477812 SPTAN1Q13813 2472 aaKnown RBP17.58■□□□□ 0.4
ACTB-210ENST00000477812 RPL36A-HNRNPH2H7BZ11 118 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 DLGAP1O14490 977 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 ATP6V1G2O95670 118 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 ITGA5P08648 1049 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 IGHV1-2P23083 117 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 POLR2IP36954 125 aaKnown RBP17.57■□□□□ 0.4
ACTB-210ENST00000477812 GIPRP48546 466 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 CSNK1A1P48729 337 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 CRISP1P54107 249 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 GINS1Q14691 196 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 ACSM5Q6NUN0 579 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 SLC27A4Q6P1M0 643 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 LRFN4Q6PJG9 635 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 ADCK1Q86TW2 530 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 RNASE6Q93091 150 aaKnown RBP17.57■□□□□ 0.4
ACTB-210ENST00000477812 ZNF837Q96EG3 531 aaPredicted RBP17.57■□□□□ 0.4
ACTB-210ENST00000477812 DDOQ99489 341 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 RBM24Q9BX46 236 aaKnown RBP17.57■□□□□ 0.4
ACTB-210ENST00000477812 ASB6Q9NWX5 421 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 GLTPQ9NZD2 209 aa17.57■□□□□ 0.4
ACTB-210ENST00000477812 PRSS37A4D1T9 235 aa17.56■□□□□ 0.4
ACTB-210ENST00000477812 ZAR1LA6NP61 321 aa17.56■□□□□ 0.4
ACTB-210ENST00000477812 H7C1C5 153 aa17.56■□□□□ 0.4
ACTB-210ENST00000477812 HIST1H1CP16403 213 aaKnown RBP17.56■□□□□ 0.4
ACTB-210ENST00000477812 PSMB1P20618 241 aaKnown RBP17.56■□□□□ 0.4
ACTB-210ENST00000477812 POU1F1P28069 291 aa17.56■□□□□ 0.4
ACTB-210ENST00000477812 GRK5P34947 590 aa17.56■□□□□ 0.4
ACTB-210ENST00000477812 CDKN2AP42771 156 aaKnown RBP17.56■□□□□ 0.4
ACTB-210ENST00000477812 LCN6P62502 163 aa17.56■□□□□ 0.4
ACTB-210ENST00000477812 FAPQ12884 760 aa17.56■□□□□ 0.4
ACTB-210ENST00000477812 P2RY6Q15077 328 aa17.56■□□□□ 0.4
ACTB-210ENST00000477812 PTGES3Q15185 160 aaKnown RBP17.56■□□□□ 0.4
ACTB-210ENST00000477812 LRRC36Q1X8D7 754 aa17.56■□□□□ 0.4
ACTB-210ENST00000477812 STAC2Q6ZMT1 411 aa17.56■□□□□ 0.4
ACTB-210ENST00000477812 UBE2J2Q8N2K1 259 aa17.56■□□□□ 0.4
ACTB-210ENST00000477812 GPR137CQ8N3F9 429 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms