RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 OR6N1Q8NGY5 312 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 FGFBP3Q8TAT2 258 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 ST7LQ8TDW4 575 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 WFDC12Q8WWY7 111 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 SLC35B4Q969S0 331 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 ELMOD3Q96FG2 381 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 SLC41A3Q96GZ6 507 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 PKP2Q99959 881 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 ARMC7Q9H6L4 198 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 TCF7L2Q9NQB0 619 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 IGKV1D-42A0A075B6H8 117 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 TRAV36DV7A0A075B6V5 113 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 ISPDA4D126 451 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 MS4A18H0YCH9 400 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 SNAP29O95721 258 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 NQO1P15559 274 aaKnown RBP17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 MAKP20794 623 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 MVDP53602 400 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 HOXC5Q00444 222 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 TSTQ16762 297 aaKnown RBP17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 MS4A18Q3C1V0 323 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 FAM209AQ5JX71 171 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 PIWIL3Q7Z3Z3 882 aaKnown RBP17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 SKA3Q8IX90 412 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 GLB1L3Q8NCI6 653 aaPredicted RBP17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 C11orf40Q8WZ69 217 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 TMIGD2Q96BF3 282 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 MMP27Q9H306 513 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 OR51B6Q9H340 312 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 MMP26Q9NRE1 261 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 UBAP1Q9NZ09 502 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 PDP1Q9P0J1 537 aaPredicted RBP17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 AUP1Q9Y679 476 aa17.15■□□□□ 0.34
PDLIM1-202ENST00000477757 A0A087WUJ7 227 aa17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 ZNF500O60304 480 aaPredicted RBP17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 KRT75O95678 551 aa17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 LCKP06239 509 aa17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 ZNF154Q13106 437 aa17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 MOGQ16653 247 aa17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 RPS26P11Q5JNZ5 115 aaPredicted RBP17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 ZNF621Q6ZSS3 439 aa17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 SCAIQ8N9R8 606 aa17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 SLC38A5Q8WUX1 472 aa17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 TXNDC15Q96J42 360 aa17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 TEX37Q96LM6 180 aa17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 C1orf198Q9H425 327 aa17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 CACYBPQ9HB71 228 aaKnown RBP17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 CDH20Q9HBT6 801 aa17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 ZNF232Q9UNY5 417 aa17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 POLR3KQ9Y2Y1 108 aaPredicted RBP17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 KMT2CQ8NEZ4 4911 aaKnown RBP17.14■□□□□ 0.33
PDLIM1-202ENST00000477757 MFN2O95140 757 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 IGHV3-13P01766 116 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 IGHMP01871 453 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 OR8G3PP0DMU2 310 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 CCL2P13500 99 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 ZNF12P17014 697 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 CBLP22681 906 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 GLO1Q04760 184 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 SLC3A1Q07837 685 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 LRRC74AQ0VAA2 488 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 PMS2P3Q13401 168 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 SPATC1Q76KD6 591 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 OR6S1Q8NH40 331 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 CCL17Q92583 94 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 C16orf45Q96MC5 204 aaPredicted RBP17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 BCL2L14Q9BZR8 327 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 RPS6KB2Q9UBS0 482 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 GPR45Q9Y5Y3 372 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 TANC2Q9HCD6 1990 aa17.13■□□□□ 0.33
PDLIM1-202ENST00000477757 A0A1B0GUS0 222 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 ENTPD5O75356 428 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 UBOX5O94941 541 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 KNG1P01042 644 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 ETFAP13804 333 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 DRD4P21917 467 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 OMGP23515 440 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 CSNK1A1P48729 337 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 ZNF81P51508 661 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 SRSF4Q08170 494 aaKnown RBP17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 PUDPQ08623 228 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 C9orf139Q6ZV77 190 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 SLC22A24Q8N4F4 322 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 LSMEM1Q8N8F7 131 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 TCP10LQ8TDR4 215 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 UBLCP1Q8WVY7 318 aaPredicted RBP17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 TMEM19Q96HH6 336 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 MRI1Q9BV20 369 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 IFT52Q9Y366 437 aa17.12■□□□□ 0.33
PDLIM1-202ENST00000477757 A0A0G2JPF8 293 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 A0A1B0GWA3 101 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 ZNF726A6NNF4 738 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 HNRNPCL2B2RXH8 293 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 HNRNPCL3B7ZW38 293 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 TRAPPC2LH3BP13 241 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 TM9SF1O15321 606 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 HNRNPCL1O60812 293 aaKnown RBP17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 IGHV1-46P01743 117 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 BPGMP07738 259 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 HNRNPCL4P0DMR1 293 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms