RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 GLTPQ9NZD2 209 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 POFUT2Q9Y2G5 429 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 ARFGEF3Q5TH69 2177 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 PRSS23O95084 383 aa18.39■□□□□ 0.53
LIME1-204ENST00000476183 HLA-HP01893 362 aa18.39■□□□□ 0.53
LIME1-204ENST00000476183 PGA4P0DJD7 388 aa18.39■□□□□ 0.53
LIME1-204ENST00000476183 PGA3P0DJD8 388 aa18.39■□□□□ 0.53
LIME1-204ENST00000476183 B4GALT1P15291 398 aa18.39■□□□□ 0.53
LIME1-204ENST00000476183 CAPZA2P47755 286 aa18.39■□□□□ 0.53
LIME1-204ENST00000476183 IDH3GP51553 393 aaPredicted RBP18.39■□□□□ 0.53
LIME1-204ENST00000476183 FKBP9P1Q75LS8 142 aa18.39■□□□□ 0.53
LIME1-204ENST00000476183 BIVMQ86UB2 503 aa18.39■□□□□ 0.53
LIME1-204ENST00000476183 MEX3DQ86XN8 651 aaKnown RBP18.39■□□□□ 0.53
LIME1-204ENST00000476183 FOXB1Q99853 325 aa18.39■□□□□ 0.53
LIME1-204ENST00000476183 FNDC11Q9BVV2 318 aa18.39■□□□□ 0.53
LIME1-204ENST00000476183 CACNG6Q9BXT2 260 aa18.39■□□□□ 0.53
LIME1-204ENST00000476183 ADA2Q9NZK5 511 aa18.39■□□□□ 0.53
LIME1-204ENST00000476183 ZNF224Q9NZL3 707 aa18.39■□□□□ 0.53
LIME1-204ENST00000476183 SMAD7O15105 426 aaKnown RBP18.38■□□□□ 0.53
LIME1-204ENST00000476183 BCL10O95999 233 aa18.38■□□□□ 0.53
LIME1-204ENST00000476183 CRYAAP02489 173 aa18.38■□□□□ 0.53
LIME1-204ENST00000476183 IFI30P13284 250 aa18.38■□□□□ 0.53
LIME1-204ENST00000476183 APOBEC3AP31941 199 aaPredicted RBP18.38■□□□□ 0.53
LIME1-204ENST00000476183 ACVR1BP36896 505 aa18.38■□□□□ 0.53
LIME1-204ENST00000476183 RIPPLY3P57055 190 aa18.38■□□□□ 0.53
LIME1-204ENST00000476183 LAPTM4AQ15012 233 aa18.38■□□□□ 0.53
LIME1-204ENST00000476183 CLEC12BQ2HXU8 276 aa18.38■□□□□ 0.53
LIME1-204ENST00000476183 GLYATQ6IB77 296 aa18.38■□□□□ 0.53
LIME1-204ENST00000476183 CCDC36Q8IYA8 594 aa18.38■□□□□ 0.53
LIME1-204ENST00000476183 FAM156AQ8NDB6 213 aa18.38■□□□□ 0.53
LIME1-204ENST00000476183 ZNF566Q969W8 418 aa18.38■□□□□ 0.53
LIME1-204ENST00000476183 MOV10Q9HCE1 1003 aaKnown RBP18.38■□□□□ 0.53
LIME1-204ENST00000476183 INIPQ9NRY2 104 aa18.38■□□□□ 0.53
LIME1-204ENST00000476183 A0A1W2PRG6 482 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 MAKP20794 623 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 IFNA8P32881 189 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 ARR3P36575 388 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 NPRL3Q12980 569 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 TNK1Q13470 666 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 TRAM2Q15035 370 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 MST1LQ2TV78 715 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 NRMQ8IXM6 262 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 ASB10Q8WXI3 467 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 BPIFA2Q96DR5 249 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 ZNF75AQ96N20 296 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 LRRC37BQ96QE4 947 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 KCNS3Q9BQ31 491 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 MRPL13Q9BYD1 178 aaKnown RBP18.37■□□□□ 0.53
LIME1-204ENST00000476183 TAGLN3Q9UI15 199 aa18.37■□□□□ 0.53
LIME1-204ENST00000476183 DYNC1I1O14576 645 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 IGHG1P01857 330 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 CD79AP11912 226 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 HGFACQ04756 655 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 PIGFQ07326 219 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 FHL1Q13642 323 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 ETFDHQ16134 617 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 HIST3H3Q16695 136 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 TBPL2Q6SJ96 375 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 DNM1P46Q6ZS02 220 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 Q71RC1 249 aaPredicted RBP18.36■□□□□ 0.53
LIME1-204ENST00000476183 FAM86B1Q8N7N1 296 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 FGFBP3Q8TAT2 258 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 HTRA1Q92743 480 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 ZNF347Q96SE7 839 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 SEPHS2Q99611 448 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 CA10Q9NS85 328 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 DCAF13Q9NV06 445 aaKnown RBP18.36■□□□□ 0.53
LIME1-204ENST00000476183 RPS6KA6Q9UK32 745 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 HIF3AQ9Y2N7 669 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 ENPP4Q9Y6X5 453 aa18.36■□□□□ 0.53
LIME1-204ENST00000476183 A0A087WUU8 490 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 IGHV2OR16-5A0A0B4J2B6 119 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 DHHO43323 396 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 TRMUO75648 421 aaKnown RBP18.35■□□□□ 0.53
LIME1-204ENST00000476183 QDPRP09417 244 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 TCN1P20061 433 aaPredicted RBP18.35■□□□□ 0.53
LIME1-204ENST00000476183 MYBPC1Q00872 1141 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 PRKCDQ05655 676 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 FXNQ16595 210 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 SWI5Q1ZZU3 235 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 ARMC4Q5T2S8 1044 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 CLEC9AQ6UXN8 241 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 SKA3Q8IX90 412 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 PGAM4Q8N0Y7 254 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 ACOT11Q8WXI4 607 aaPredicted RBP18.35■□□□□ 0.53
LIME1-204ENST00000476183 MCHR2Q969V1 340 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 MS4A3Q96HJ5 214 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 CCT8L2Q96SF2 557 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 CD300AQ9UGN4 299 aa18.35■□□□□ 0.53
LIME1-204ENST00000476183 FN1P02751 2386 aaKnown RBP18.34■□□□□ 0.53
LIME1-204ENST00000476183 NAV3Q8IVL0 2385 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 HTR3EA5X5Y0 456 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 MCIDASD6RGH6 385 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 DCTN3O75935 186 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 LY6G6DO95868 133 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 PATE4P0C8F1 98 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 HSD17B1P14061 328 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 ZNF14P17017 642 aaPredicted RBP18.34■□□□□ 0.53
LIME1-204ENST00000476183 MSX2P35548 267 aaPredicted RBP18.34■□□□□ 0.53
LIME1-204ENST00000476183 DAP3P51398 398 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms