RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 TSPAN15O95858 294 aa17.1■□□□□ 0.33
HDAC11-217ENST00000475818 MT-ND5P03915 603 aa17.1■□□□□ 0.33
HDAC11-217ENST00000475818 RBMXP38159 391 aaKnown RBP17.1■□□□□ 0.33
HDAC11-217ENST00000475818 ZNF81P51508 661 aa17.1■□□□□ 0.33
HDAC11-217ENST00000475818 SEC61A1P61619 476 aaKnown RBP17.1■□□□□ 0.33
HDAC11-217ENST00000475818 HOXC5Q00444 222 aa17.1■□□□□ 0.33
HDAC11-217ENST00000475818 H1FNTQ75WM6 255 aaPredicted RBP17.1■□□□□ 0.33
HDAC11-217ENST00000475818 TRMT10CQ7L0Y3 403 aaKnown RBP17.1■□□□□ 0.33
HDAC11-217ENST00000475818 SERPINA11Q86U17 422 aa17.1■□□□□ 0.33
HDAC11-217ENST00000475818 HOMEZQ8IX15 550 aa17.1■□□□□ 0.33
HDAC11-217ENST00000475818 MIER2Q8N344 545 aa17.1■□□□□ 0.33
HDAC11-217ENST00000475818 PARP8Q8N3A8 854 aa17.1■□□□□ 0.33
HDAC11-217ENST00000475818 BHLHE22Q8NFJ8 381 aaPredicted RBP17.1■□□□□ 0.33
HDAC11-217ENST00000475818 OR52E2Q8NGJ4 325 aa17.1■□□□□ 0.33
HDAC11-217ENST00000475818 PNPT1Q8TCS8 783 aaKnown RBP17.1■□□□□ 0.33
HDAC11-217ENST00000475818 DCAF16Q9NXF7 216 aa17.1■□□□□ 0.33
HDAC11-217ENST00000475818 NOP53Q9NZM5 478 aaKnown RBP17.1■□□□□ 0.33
HDAC11-217ENST00000475818 UBOX5O94941 541 aa17.09■□□□□ 0.33
HDAC11-217ENST00000475818 IGHV1-46P01743 117 aa17.09■□□□□ 0.33
HDAC11-217ENST00000475818 CRYBA1P05813 215 aa17.09■□□□□ 0.33
HDAC11-217ENST00000475818 SBK2P0C263 348 aa17.09■□□□□ 0.33
HDAC11-217ENST00000475818 ALDH3A1P30838 453 aa17.09■□□□□ 0.33
HDAC11-217ENST00000475818 RELBQ01201 579 aa17.09■□□□□ 0.33
HDAC11-217ENST00000475818 EMX2Q04743 252 aa17.09■□□□□ 0.33
HDAC11-217ENST00000475818 MAD2L1Q13257 205 aaPredicted RBP17.09■□□□□ 0.33
HDAC11-217ENST00000475818 COX20Q5RI15 118 aa17.09■□□□□ 0.33
HDAC11-217ENST00000475818 ZNF362Q5T0B9 420 aaPredicted RBP17.09■□□□□ 0.33
HDAC11-217ENST00000475818 C4orf33Q8N1A6 199 aa17.09■□□□□ 0.33
HDAC11-217ENST00000475818 NOA1Q8NC60 698 aaKnown RBP17.09■□□□□ 0.33
HDAC11-217ENST00000475818 VPS37AQ8NEZ2 397 aa17.09■□□□□ 0.33
HDAC11-217ENST00000475818 FAM110DQ8TAY7 271 aaPredicted RBP17.09■□□□□ 0.33
HDAC11-217ENST00000475818 LRR1Q96L50 414 aa17.09■□□□□ 0.33
HDAC11-217ENST00000475818 DCLRE1CQ96SD1 692 aaKnown RBP17.09■□□□□ 0.33
HDAC11-217ENST00000475818 MECRQ9BV79 373 aa17.09■□□□□ 0.33
HDAC11-217ENST00000475818 ZNF443Q9Y2A4 671 aaPredicted RBP17.09■□□□□ 0.33
HDAC11-217ENST00000475818 NQO1P15559 274 aaKnown RBP17.08■□□□□ 0.32
HDAC11-217ENST00000475818 ARRB2P32121 409 aa17.08■□□□□ 0.32
HDAC11-217ENST00000475818 SLC3A1Q07837 685 aa17.08■□□□□ 0.32
HDAC11-217ENST00000475818 CASP8Q14790 479 aa17.08■□□□□ 0.32
HDAC11-217ENST00000475818 MAPK11Q15759 364 aa17.08■□□□□ 0.32
HDAC11-217ENST00000475818 FIP1L1Q6UN15 594 aaKnown RBP17.08■□□□□ 0.32
HDAC11-217ENST00000475818 SNX32Q86XE0 403 aa17.08■□□□□ 0.32
HDAC11-217ENST00000475818 PPP1R36Q96LQ0 422 aa17.08■□□□□ 0.32
HDAC11-217ENST00000475818 C1RLQ9NZP8 487 aa17.08■□□□□ 0.32
HDAC11-217ENST00000475818 EGFL7Q9UHF1 273 aa17.08■□□□□ 0.32
HDAC11-217ENST00000475818 LOC102725191A0A1B0GVB3 256 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 CLPSL1A2RUU4 121 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 SLC22A31A6NKX4 558 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 SMIM23A6NLE4 172 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 MS4A18H0YCH9 400 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 SERPINI2O75830 405 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 PRB2P02812 416 aaPredicted RBP17.07■□□□□ 0.32
HDAC11-217ENST00000475818 ANXA11P50995 505 aaKnown RBP17.07■□□□□ 0.32
HDAC11-217ENST00000475818 MOGQ16653 247 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 MS4A18Q3C1V0 323 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 SPRNQ5BIV9 151 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 FAM209AQ5JX71 171 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 SPANXN4Q5MJ08 99 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 FAM69AQ5T7M9 428 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 C9orf139Q6ZV77 190 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 LRRC34Q8IZ02 419 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 CNPY4Q8N129 248 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 GEMIN6Q8WXD5 167 aaKnown RBP17.07■□□□□ 0.32
HDAC11-217ENST00000475818 ZDHHC16Q969W1 377 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 SH3GL3Q99963 347 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 ASIC5Q9NY37 505 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 CHST2Q9Y4C5 530 aa17.07■□□□□ 0.32
HDAC11-217ENST00000475818 CCDC154A6NI56 674 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 ZNF726A6NNF4 738 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 TM9SF1O15321 606 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 PIN1P1O15428 100 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 OR2T1O43869 369 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 FZD7O75084 574 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 NGFP01138 241 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 IGHV2-70P01814 119 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 SELEP16581 610 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 KRT4P19013 534 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 UCP2P55851 309 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 PMS2P3Q13401 168 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 DEFB112Q30KQ8 113 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 RNF220Q5VTB9 566 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 C17orf53Q8N3J3 647 aaPredicted RBP17.06■□□□□ 0.32
HDAC11-217ENST00000475818 SLC38A4Q969I6 547 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 RNF121Q9H920 327 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 MARCH7Q9H992 704 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 PRDM4Q9UKN5 801 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 POLR3KQ9Y2Y1 108 aaPredicted RBP17.06■□□□□ 0.32
HDAC11-217ENST00000475818 NPTNQ9Y639 398 aa17.06■□□□□ 0.32
HDAC11-217ENST00000475818 TRAV40A0A0B4J280 105 aa17.05■□□□□ 0.32
HDAC11-217ENST00000475818 ZSCAN5BA6NJL1 495 aa17.05■□□□□ 0.32
HDAC11-217ENST00000475818 IGHV3-13P01766 116 aa17.05■□□□□ 0.32
HDAC11-217ENST00000475818 CD80P33681 288 aa17.05■□□□□ 0.32
HDAC11-217ENST00000475818 SLC6A9P48067 706 aa17.05■□□□□ 0.32
HDAC11-217ENST00000475818 CSNK1A1P48729 337 aa17.05■□□□□ 0.32
HDAC11-217ENST00000475818 TAF9Q16594 264 aa17.05■□□□□ 0.32
HDAC11-217ENST00000475818 TBC1D28Q2M2D7 210 aa17.05■□□□□ 0.32
HDAC11-217ENST00000475818 SMU1Q2TAY7 513 aa17.05■□□□□ 0.32
HDAC11-217ENST00000475818 RPS26P11Q5JNZ5 115 aaPredicted RBP17.05■□□□□ 0.32
HDAC11-217ENST00000475818 SPATA46Q5T0L3 261 aa17.05■□□□□ 0.32
HDAC11-217ENST00000475818 Q6ZPA2 131 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms