RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 NEUROG1Q92886 237 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 FBXW5Q969U6 566 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 TNFRSF13CQ96RJ3 184 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 TXNIPQ9H3M7 391 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 MUC13Q9H3R2 512 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 HEATR1Q9H583 2144 aaKnown RBP14.37□□□□□ -0.11
ATG4B-216ENST00000475195 B3GNT2Q9NY97 397 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 CISD1Q9NZ45 108 aaKnown RBP14.37□□□□□ -0.11
ATG4B-216ENST00000475195 PLCE1Q9P212 2302 aa14.37□□□□□ -0.11
ATG4B-216ENST00000475195 hCG_2039718K7EN88 272 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 M0R1B8 84 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 OVOL3O00110 214 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 PTP4A3O75365 173 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 SERPINI2O75830 405 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 IGHMP01871 453 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 CBR1P16152 277 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 HMGA2P52926 109 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 UBE2NP61088 152 aaKnown RBP14.36□□□□□ -0.11
ATG4B-216ENST00000475195 RUNX1T1Q06455 604 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 MELKQ14680 651 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 PGGHGQ32M88 737 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 ALG10Q5BKT4 473 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 MTX3Q5HYI7 312 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 KLHL24Q6TFL4 600 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 ZNF730Q6ZMV8 503 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 RRM2BQ7LG56 351 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 OAFQ86UD1 273 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 SMAP2Q8WU79 429 aaPredicted RBP14.36□□□□□ -0.11
ATG4B-216ENST00000475195 CCL19Q99731 98 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 ULBP2Q9BZM5 246 aa14.36□□□□□ -0.11
ATG4B-216ENST00000475195 ZNF701Q9NV72 531 aaPredicted RBP14.36□□□□□ -0.11
ATG4B-216ENST00000475195 ZNF469Q96JG9 3925 aaPredicted RBP14.36□□□□□ -0.11
ATG4B-216ENST00000475195 IGHV1-18A0A0C4DH31 117 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 TRBV4-1A0A0J9YWV2 114 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 TCRBV5S2A0A599 114 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 EFCAB9A8MZ26 197 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 CDC42EP2O14613 210 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 TRMUO75648 421 aaKnown RBP14.35□□□□□ -0.11
ATG4B-216ENST00000475195 DIRAS1O95057 198 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 IGHG1P01857 330 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 SAGP10523 405 aaPredicted RBP14.35□□□□□ -0.11
ATG4B-216ENST00000475195 ACADSP16219 412 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 OMPP47874 163 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 LIMS1P48059 325 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 DAP3P51398 398 aaKnown RBP14.35□□□□□ -0.11
ATG4B-216ENST00000475195 SMIM11AP58511 58 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 NRN1LQ496H8 165 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 LCN8Q6JVE9 175 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 HDDC2Q7Z4H3 204 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 POP5Q969H6 163 aaKnown RBP14.35□□□□□ -0.11
ATG4B-216ENST00000475195 NMD3Q96D46 503 aaKnown RBP14.35□□□□□ -0.11
ATG4B-216ENST00000475195 ZNF75AQ96N20 296 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 SLC38A2Q96QD8 506 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 ZNF347Q96SE7 839 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 FOXB1Q99853 325 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 GSX2Q9BZM3 304 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 DENND2DQ9H6A0 471 aaPredicted RBP14.35□□□□□ -0.11
ATG4B-216ENST00000475195 STX18Q9P2W9 335 aaKnown RBP14.35□□□□□ -0.11
ATG4B-216ENST00000475195 ZNF346Q9UL40 294 aaKnown RBP14.35□□□□□ -0.11
ATG4B-216ENST00000475195 TMEM5Q9Y2B1 443 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 POFUT2Q9Y2G5 429 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 F8P00451 2351 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 ARID1AO14497 2285 aa14.35□□□□□ -0.11
ATG4B-216ENST00000475195 ZNF503-AS2A6NEH8 195 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 E7EQL1 145 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 DHHO43323 396 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 MGRN1O60291 552 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 CD8AP01732 235 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 FABP3P05413 133 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 SOD3P08294 240 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 QDPRP09417 244 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 ZNF26P17031 533 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-216ENST00000475195 ATP6V1B2P21281 511 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 ARR3P36575 388 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 MAGEA2P43356 314 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 ADAM8P78325 824 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 SPOCK1Q08629 439 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 SEC23BQ15437 767 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 ZBED5Q49AG3 693 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 SLC22A25Q6T423 547 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 PRSS57Q6UWY2 283 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 ZNF813Q6ZN06 617 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 DTX2Q86UW9 622 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 KRTAP1-3Q8IUG1 177 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 DEPDC4Q8N2C3 294 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 PIAS4Q8N2W9 510 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-216ENST00000475195 OR51A7Q8NH64 312 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 MCHR2Q969V1 340 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 MCUR1Q96AQ8 359 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 SLC7A6OSQ96CW6 309 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-216ENST00000475195 ASB9Q96DX5 294 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 KCNK17Q96T54 332 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 KATNB1Q9BVA0 655 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 SMURF2Q9HAU4 748 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 ZNF224Q9NZL3 707 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 SIGLEC7Q9Y286 467 aa14.34□□□□□ -0.11
ATG4B-216ENST00000475195 TEP1Q99973 2627 aaKnown RBP14.34□□□□□ -0.11
ATG4B-216ENST00000475195 TRAV27A0A087WT01 109 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 SH3PXD2BA1X283 911 aa14.33□□□□□ -0.12
ATG4B-216ENST00000475195 ACOT8O14734 319 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms