RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 CADM1Q9BY67 442 aaKnown RBP14.19□□□□□ -0.14
SRM-204ENST00000475189 MRPL13Q9BYD1 178 aaKnown RBP14.19□□□□□ -0.14
SRM-204ENST00000475189 OBP2BQ9NPH6 170 aa14.19□□□□□ -0.14
SRM-204ENST00000475189 PLEKHA6Q9Y2H5 1048 aa14.19□□□□□ -0.14
SRM-204ENST00000475189 RNF115Q9Y4L5 304 aa14.19□□□□□ -0.14
SRM-204ENST00000475189 ARPC4-TTLL3A0A0A6YYG9 625 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 PTP4A3O75365 173 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 TRMUO75648 421 aaKnown RBP14.18□□□□□ -0.14
SRM-204ENST00000475189 ATP5HO75947 161 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 STAMBPO95630 424 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 WNT11O96014 354 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 IGHG1P01857 330 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 HOXB1P14653 301 aaPredicted RBP14.18□□□□□ -0.14
SRM-204ENST00000475189 ACADSP16219 412 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 ZNF26P17031 533 aaPredicted RBP14.18□□□□□ -0.14
SRM-204ENST00000475189 DAP3P51398 398 aaKnown RBP14.18□□□□□ -0.14
SRM-204ENST00000475189 CTXN1P60606 82 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 CHRNB3Q05901 458 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 TAF11Q15544 211 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 HIST3H3Q16695 136 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 FAM98BQ52LJ0 330 aaKnown RBP14.18□□□□□ -0.14
SRM-204ENST00000475189 KLHL17Q6TDP4 642 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 KLHL24Q6TFL4 600 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 IGFN1Q86VF2 1251 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 NINJ1Q92982 152 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 ALPK1Q96QP1 1244 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 GPA33Q99795 319 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 UBTD1Q9HAC8 227 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 ZNF346Q9UL40 294 aaKnown RBP14.18□□□□□ -0.14
SRM-204ENST00000475189 EDARQ9UNE0 448 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 POFUT2Q9Y2G5 429 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 MAGED1Q9Y5V3 778 aaPredicted RBP14.18□□□□□ -0.14
SRM-204ENST00000475189 AKAP9Q99996 3911 aa14.18□□□□□ -0.14
SRM-204ENST00000475189 AQP12BA6NM10 295 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 CENPBD1B2RD01 187 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 M0R1B8 84 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 KRT36O76013 467 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 SEC14L2O76054 403 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 ATE1O95260 518 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 IGHMP01871 453 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 RAF1P04049 648 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 DNASE1P24855 282 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 PTAFRP25105 342 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 CD40P25942 277 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 HMGA2P52926 109 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 IST1P53990 364 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 CLRN1P58418 232 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 UBE2NP61088 152 aaKnown RBP14.17□□□□□ -0.14
SRM-204ENST00000475189 RPL27P61353 136 aaKnown RBP14.17□□□□□ -0.14
SRM-204ENST00000475189 TUBA1BP68363 451 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 TUBA4AP68366 448 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 ADAM5Q6NVV9 412 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 TMEM108Q6UXF1 575 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 TUBA1AQ71U36 451 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 ZNF627Q7L945 461 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 HDDC2Q7Z4H3 204 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 ZER1Q7Z7L7 766 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 AQP12AQ8IXF9 295 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 NOXO1Q8NFA2 376 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 TRIM15Q9C019 465 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 KRCC1Q9NPI7 259 aaPredicted RBP14.17□□□□□ -0.14
SRM-204ENST00000475189 CCM2LQ9NUG4 571 aaPredicted RBP14.17□□□□□ -0.14
SRM-204ENST00000475189 ITGB1BP2Q9UKP3 347 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 TMCC3Q9ULS5 477 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 AURKCQ9UQB9 309 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 POMPQ9Y244 141 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 SIGLEC7Q9Y286 467 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 LYVE1Q9Y5Y7 322 aa14.17□□□□□ -0.14
SRM-204ENST00000475189 UNC119BA6NIH7 251 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 SHISA9B4DS77 424 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 ABCD4O14678 606 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 HS3ST1O14792 307 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 DHHO43323 396 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 QDPRP09417 244 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 RAP2AP10114 183 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 CD53P19397 219 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 RASSF2P50749 326 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 FXYD6P3P58550 94 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 MYBPC1Q00872 1141 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 TOP3AQ13472 1001 aaPredicted RBP14.16□□□□□ -0.14
SRM-204ENST00000475189 KEAP1Q14145 624 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 ZNF813Q6ZN06 617 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 ADGRG5Q8IZF4 528 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 SYT14Q8NB59 555 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 KBTBD8Q8NFY9 601 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 AKAP1Q92667 903 aaKnown RBP eCLIP14.16□□□□□ -0.14
SRM-204ENST00000475189 HDAC2Q92769 488 aaKnown RBP14.16□□□□□ -0.14
SRM-204ENST00000475189 NEUROG1Q92886 237 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 MCHR2Q969V1 340 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 RSRC1Q96IZ7 334 aaKnown RBP14.16□□□□□ -0.14
SRM-204ENST00000475189 TSPAN32Q96QS1 320 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 KCNK17Q96T54 332 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 FOXB1Q99853 325 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 STX18Q9P2W9 335 aaKnown RBP14.16□□□□□ -0.14
SRM-204ENST00000475189 SLC7A8Q9UHI5 535 aa14.16□□□□□ -0.14
SRM-204ENST00000475189 ZNF503-AS2A6NEH8 195 aa14.15□□□□□ -0.14
SRM-204ENST00000475189 TNFRSF11BO00300 401 aa14.15□□□□□ -0.14
SRM-204ENST00000475189 OR10H3O60404 316 aa14.15□□□□□ -0.14
SRM-204ENST00000475189 NDUFB2O95178 105 aa14.15□□□□□ -0.14
SRM-204ENST00000475189 B4GALT1P15291 398 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms