RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 FGFBP3Q8TAT2 258 aa12.33□□□□□ -0.44
COL2A1-205ENST00000474996 RDH5Q92781 318 aa12.33□□□□□ -0.44
COL2A1-205ENST00000474996 YIPF5Q969M3 257 aa12.33□□□□□ -0.44
COL2A1-205ENST00000474996 SPDL1Q96EA4 605 aa12.33□□□□□ -0.44
COL2A1-205ENST00000474996 TMEM43Q9BTV4 400 aa12.33□□□□□ -0.44
COL2A1-205ENST00000474996 DENND2DQ9H6A0 471 aaPredicted RBP12.33□□□□□ -0.44
COL2A1-205ENST00000474996 METTL17Q9H7H0 456 aaPredicted RBP12.33□□□□□ -0.44
COL2A1-205ENST00000474996 LPAR2Q9HBW0 351 aa12.33□□□□□ -0.44
COL2A1-205ENST00000474996 TCF7L2Q9NQB0 619 aa12.33□□□□□ -0.44
COL2A1-205ENST00000474996 CCDC167Q9P0B6 97 aa12.33□□□□□ -0.44
COL2A1-205ENST00000474996 SLC13A4Q9UKG4 626 aa12.33□□□□□ -0.44
COL2A1-205ENST00000474996 TRBV5-3A0A0A0MS03 114 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 A0A1W2PPW3 197 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 POLR3GO15318 223 aaPredicted RBP12.32□□□□□ -0.44
COL2A1-205ENST00000474996 VENTXO95231 258 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 ADORA3P0DMS8 318 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 SAGP10523 405 aaPredicted RBP12.32□□□□□ -0.44
COL2A1-205ENST00000474996 NAT2P11245 290 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 PPIBP23284 216 aaKnown RBP12.32□□□□□ -0.44
COL2A1-205ENST00000474996 SLC6A2P23975 617 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 MDH1P40925 334 aaKnown RBP12.32□□□□□ -0.44
COL2A1-205ENST00000474996 ALKBH6Q3KRA9 238 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 RANBP3LQ86VV4 465 aaPredicted RBP12.32□□□□□ -0.44
COL2A1-205ENST00000474996 ARMC8Q8IUR7 673 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 ZNF584Q8IVC4 421 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 SKA3Q8IX90 412 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 BHLHE22Q8NFJ8 381 aaPredicted RBP12.32□□□□□ -0.44
COL2A1-205ENST00000474996 OR5J2Q8NH18 312 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 TMEM186Q96B77 213 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 ZNF607Q96SK3 696 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 RACGAP1Q9H0H5 632 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 TMEM38AQ9H6F2 299 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 SLC52A3Q9NQ40 469 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 ZNF275Q9NSD4 429 aaPredicted RBP12.32□□□□□ -0.44
COL2A1-205ENST00000474996 INTS9Q9NV88 658 aaKnown RBP12.32□□□□□ -0.44
COL2A1-205ENST00000474996 HIF1ANQ9NWT6 349 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 TREM2Q9NZC2 230 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 SLC7A8Q9UHI5 535 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 DUSP13Q9UII6 198 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 GMEB1Q9Y692 573 aa12.32□□□□□ -0.44
COL2A1-205ENST00000474996 M0R3H8 397 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 PPIHO43447 177 aaKnown RBP12.31□□□□□ -0.44
COL2A1-205ENST00000474996 SHOX2O60902 331 aaPredicted RBP12.31□□□□□ -0.44
COL2A1-205ENST00000474996 SERPINB7O75635 380 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 NCR1O76036 304 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 MFN2O95140 757 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 MT-ATP6P00846 226 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 SERPINA5P05154 406 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 MSMBP08118 114 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 GPX2P18283 190 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 LSP1P33241 339 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 IDH3AP50213 366 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 SWT1Q5T5J6 900 aaKnown RBP12.31□□□□□ -0.44
COL2A1-205ENST00000474996 REP15Q6BDI9 236 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 C12orf54Q6X4T0 127 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 WDR88Q6ZMY6 472 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 PIWIL3Q7Z3Z3 882 aaKnown RBP12.31□□□□□ -0.44
COL2A1-205ENST00000474996 SMYD1Q8NB12 490 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 HIPK4Q8NE63 616 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 TMEM54Q969K7 222 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 MCHR1Q99705 422 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 EBF4Q9BQW3 602 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 GLTPQ9NZD2 209 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.31□□□□□ -0.44
COL2A1-205ENST00000474996 FBXL3Q9UKT7 428 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 CORO2BQ9UQ03 480 aa12.31□□□□□ -0.44
COL2A1-205ENST00000474996 DYSFO75923 2080 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 EVPLLA8MZ36 301 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 OR6A2O95222 327 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 TFP02787 698 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 FAM157BP0CG42 384 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 GAAP10253 952 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 MAGEB1P43366 347 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 TMEM33P57088 247 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 MELKQ14680 651 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 NKPD1Q17RQ9 610 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 ZNF613Q6PF04 617 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 LINC00114Q6XXX2 140 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 DEF8Q6ZN54 512 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 SLC35D2Q76EJ3 337 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 SLC22A24Q8N4F4 322 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 SEMA6DQ8NFY4 1073 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 OR6X1Q8NH79 312 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 LRRC37BQ96QE4 947 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 SH3GL3Q99963 347 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 OR51B6Q9H340 312 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 ZNF385DQ9H6B1 395 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 TAS2R5Q9NYW4 299 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 ZNF346Q9UL40 294 aaKnown RBP12.3□□□□□ -0.44
COL2A1-205ENST00000474996 ANGPT4Q9Y264 503 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 GRIP1Q9Y3R0 1128 aa12.3□□□□□ -0.44
COL2A1-205ENST00000474996 TENM1Q9UKZ4 2725 aa12.29□□□□□ -0.44
COL2A1-205ENST00000474996 A0A0A6YYJ9 748 aa12.29□□□□□ -0.44
COL2A1-205ENST00000474996 CPSF4LA6NMK7 179 aaKnown RBP12.29□□□□□ -0.44
COL2A1-205ENST00000474996 CHP2O43745 196 aa12.29□□□□□ -0.44
COL2A1-205ENST00000474996 RP2O75695 350 aa12.29□□□□□ -0.44
COL2A1-205ENST00000474996 RGS9O75916 674 aaPredicted RBP12.29□□□□□ -0.44
COL2A1-205ENST00000474996 TGDSO95455 350 aa12.29□□□□□ -0.44
COL2A1-205ENST00000474996 CH25HO95992 272 aa12.29□□□□□ -0.44
COL2A1-205ENST00000474996 CLPTM1O96005 669 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms