RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 LHFPL5Q8TAF8 219 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 NRIP3Q9NQ35 241 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 FLVCR2Q9UPI3 526 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 A0A1B0GTH9 108 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 IFNGP01579 166 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 VEGFCP49767 419 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 NR0B1P51843 470 aaKnown RBP11.3□□□□□ -0.6
RNF220-211ENST00000474956 HNRNPKP61978 463 aaKnown RBP eCLIP11.3□□□□□ -0.6
RNF220-211ENST00000474956 DHODHQ02127 395 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 SKP2Q13309 424 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 PTCRAQ6ISU1 281 aaPredicted RBP11.3□□□□□ -0.6
RNF220-211ENST00000474956 Q6ZTK2 550 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 CHMP1BQ7LBR1 199 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 KANSL1Q7Z3B3 1105 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 OR6V1Q8N148 313 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 EID2Q8N6I1 236 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 SLC38A9Q8NBW4 561 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 NPEPL1Q8NDH3 523 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 ARPC5LQ9BPX5 153 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 POLE3Q9NRF9 147 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 C14orf105Q9NVL8 296 aa11.3□□□□□ -0.6
RNF220-211ENST00000474956 hCG_1807616A0A1W2PRN6 198 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 GABARAPH6UMI1 98 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 TIAF1O95411 115 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 HPGDP15428 266 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 SLC6A6P31641 620 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 SIRPAP78324 504 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 GRM7Q14831 915 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 NSDHLQ15738 373 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 NHLRC3Q5JS37 347 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 FNDC7Q5VTL7 733 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 C3P1Q6ZMU1 363 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 KCTD20Q7Z5Y7 419 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 IQCF2Q8IXL9 164 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 SPICQ8N5J4 248 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 ZNF721Q8TF20 911 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 PELI1Q96FA3 418 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 G6PC3Q9BUM1 346 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 OR10A4Q9H209 315 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 MRPL15Q9P015 296 aaKnown RBP11.29□□□□□ -0.6
RNF220-211ENST00000474956 MKL2Q9ULH7 1088 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 KLHDC2Q9Y2U9 406 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 ZNF879B4DU55 563 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 ZNF354AO60765 605 aaPredicted RBP11.29□□□□□ -0.6
RNF220-211ENST00000474956 NDUFB2O95178 105 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 CD1AP06126 327 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 ACSM4P0C7M7 580 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 OR2T7P0C7T2 308 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 CTRB1P17538 263 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 CTRB2Q6GPI1 263 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 OR2I1PQ8NGU4 316 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 OR2T27Q8NH04 317 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 PHYHIPQ92561 330 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 SFXN2Q96NB2 322 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 CHIAQ9BZP6 476 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 MKKSQ9NPJ1 570 aaPredicted RBP11.29□□□□□ -0.6
RNF220-211ENST00000474956 KLHL9Q9P2J3 617 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 MGAT4CQ9UBM8 478 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 HRGP04196 525 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 ALDOBP05062 364 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 HOXD4P09016 255 aaPredicted RBP11.29□□□□□ -0.6
RNF220-211ENST00000474956 CPN1P15169 458 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 ZP3P21754 424 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 ARL4DP49703 201 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 RPS11P62280 158 aaKnown RBP eCLIP11.29□□□□□ -0.6
RNF220-211ENST00000474956 ZNF117Q03924 483 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 ARHGAP11AQ6P4F7 1023 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 RPL22L1Q6P5R6 122 aaKnown RBP11.29□□□□□ -0.6
RNF220-211ENST00000474956 FAM198BQ6UWH4 519 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 ZNF550Q7Z398 422 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 OR14A2Q96R54 314 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 DUSP15Q9H1R2 295 aaPredicted RBP11.29□□□□□ -0.6
RNF220-211ENST00000474956 GNG8Q9UK08 70 aa11.29□□□□□ -0.6
RNF220-211ENST00000474956 TRBV2A0A0J9YWF9 115 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 A0A1B0GTQ1 180 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 PLSCR5A0PG75 271 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 FITM1A5D6W6 292 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 TVP23AA6NH52 213 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 L7N2F9 121 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 KRT33AO76009 404 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 GIPP09681 153 aaPredicted RBP11.28□□□□□ -0.6
RNF220-211ENST00000474956 ATF4P18848 351 aaPredicted RBP11.28□□□□□ -0.6
RNF220-211ENST00000474956 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.28□□□□□ -0.6
RNF220-211ENST00000474956 OR52I2Q8NH67 350 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 ADIPOR1Q96A54 375 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 ZDHHC12Q96GR4 267 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.28□□□□□ -0.6
RNF220-211ENST00000474956 NCOR1O75376 2440 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 SDK2Q58EX2 2172 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 ELOA3DA6NLF2 546 aaPredicted RBP11.28□□□□□ -0.6
RNF220-211ENST00000474956 ARPC1BO15143 372 aaKnown RBP11.28□□□□□ -0.6
RNF220-211ENST00000474956 HCRTR2O43614 444 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 PLGP00747 810 aaPredicted RBP11.28□□□□□ -0.6
RNF220-211ENST00000474956 IGKV3-11P04433 115 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 ADRB1P08588 477 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 IFNGR1P15260 489 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 SPI1P17947 270 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 RAP2BP61225 183 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 SHBQ15464 509 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 ELOA3BQ3SY89 546 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms