RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 FUT4P22083 530 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 RPL4P36578 427 aaKnown RBP12.41□□□□□ -0.42
VAMP4-203ENST00000474047 SLC9A3P48764 834 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 FABP6P51161 128 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 LSM11P83369 360 aaKnown RBP eCLIP12.41□□□□□ -0.42
VAMP4-203ENST00000474047 VLDLRP98155 873 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 TOP3AQ13472 1001 aaPredicted RBP12.41□□□□□ -0.42
VAMP4-203ENST00000474047 FXNQ16595 210 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 ANKDD1AQ495B1 522 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 AGAP6Q5VW22 663 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 SHEQ5VZ18 495 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 PODNL1Q6PEZ8 512 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 CYP2R1Q6VVX0 501 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 TRPM8Q7Z2W7 1104 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 LRRC75A-AS1Q8N1F1 130 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 SYT14Q8NB59 555 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 OR52J3Q8NH60 311 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 NANOS1Q8WY41 292 aaKnown RBP12.41□□□□□ -0.42
VAMP4-203ENST00000474047 TMEM54Q969K7 222 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 FOXB1Q99853 325 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 MOKQ9UQ07 419 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 AURKCQ9UQB9 309 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 TRAV27A0A087WT01 109 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 A0A1W2PRQ8 180 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 PRSS23O95084 383 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 GADD45GO95257 159 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 FABP3P05413 133 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 PGA4P0DJD7 388 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 PGA3P0DJD8 388 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 CBR1P16152 277 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 ACADSP16219 412 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 ARR3P36575 388 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 GPR4P46093 362 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 ZNF84P51523 738 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 CTXN1P60606 82 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 MYBPC1Q00872 1141 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 SPIBQ01892 262 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 NPRL3Q12980 569 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 DGCR6Q14129 220 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 TGIF2LYQ8IUE0 185 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 WDFY1Q8IWB7 410 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 FBXL14Q8N1E6 418 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 ASB10Q8WXI3 467 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 TRMT61AQ96FX7 289 aaKnown RBP12.4□□□□□ -0.42
VAMP4-203ENST00000474047 C7orf34Q96L11 122 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 TNFRSF13CQ96RJ3 184 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 DHRS9Q9BPW9 319 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 TXNIPQ9H3M7 391 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 ACTR3BQ9P1U1 418 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 HIF3AQ9Y2N7 669 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 CSMD2Q7Z408 3487 aa12.4□□□□□ -0.42
VAMP4-203ENST00000474047 RAI1Q7Z5J4 1906 aaPredicted RBP12.4□□□□□ -0.42
VAMP4-203ENST00000474047 IGHV1-18A0A0C4DH31 117 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 DHHO43323 396 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 FARS2O95363 451 aaKnown RBP12.4□□□□□ -0.43
VAMP4-203ENST00000474047 SOD3P08294 240 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 NR2C1P13056 603 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 CD99P14209 185 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 PTH2RP49190 550 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 IDH3GP51553 393 aaPredicted RBP12.4□□□□□ -0.43
VAMP4-203ENST00000474047 ATP5J2P56134 94 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 ADAM8P78325 824 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 PIGFQ07326 219 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 CD47Q08722 323 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 GSG1Q2KHT4 349 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 Q5PR19 223 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 PIWIL3Q7Z3Z3 882 aaKnown RBP12.4□□□□□ -0.43
VAMP4-203ENST00000474047 TSEN54Q7Z6J9 526 aaKnown RBP12.4□□□□□ -0.43
VAMP4-203ENST00000474047 MDP1Q86V88 176 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 IGFN1Q86VF2 1251 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 DHFR2Q86XF0 187 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 NOXO1Q8NFA2 376 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 OR13C2Q8NGS9 318 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 SLC7A13Q8TCU3 470 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 FAM46AQ96IP4 442 aaKnown RBP12.4□□□□□ -0.43
VAMP4-203ENST00000474047 LRGUKQ96M69 825 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 SEPHS2Q99611 448 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 NELFAQ9H3P2 528 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 MUC13Q9H3R2 512 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 TMCC3Q9ULS5 477 aa12.4□□□□□ -0.43
VAMP4-203ENST00000474047 PRPF19Q9UMS4 504 aaKnown RBP12.4□□□□□ -0.43
VAMP4-203ENST00000474047 CENPBD1B2RD01 187 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 E7EQL1 145 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 ATP6V1G2-DDX39BF2Z307 99 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 TRMUO75648 421 aaKnown RBP12.39□□□□□ -0.43
VAMP4-203ENST00000474047 PDE5AO76074 875 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 RAB36O95755 333 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 HLA-HP01893 362 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 OR8G3PP0DMU2 310 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 T-ENOLP0DO92 83 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 ACVR1BP36896 505 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 RPL27P61353 136 aaKnown RBP12.39□□□□□ -0.43
VAMP4-203ENST00000474047 PGGHGQ32M88 737 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 C3orf36Q3SXR2 165 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 ZBED5Q49AG3 693 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 MTX3Q5HYI7 312 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 LRFN4Q6PJG9 635 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 TMPRSS11FQ6ZWK6 438 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 ZDHHC21Q8IVQ6 265 aa12.39□□□□□ -0.43
VAMP4-203ENST00000474047 FAM169BQ8N8A8 192 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms