RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 RNF115Q9Y4L5 304 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 FREM1Q5H8C1 2179 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 CELSR2Q9HCU4 2923 aa12.06□□□□□ -0.48
USF1-205ENST00000473969 NOTCH2Q04721 2471 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 CRYBG3Q68DQ2 2970 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 NPIPB13A6NJU9 1138 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 NPIPB4C9JG80 1138 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 EBAG9O00559 213 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 XKRYO14609 159 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 CDC42EP2O14613 210 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 SIAH2O43255 324 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 TRMUO75648 421 aaKnown RBP12.05□□□□□ -0.48
USF1-205ENST00000473969 CCNB2O95067 398 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 NDUFB2O95178 105 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 TSPAN19P0C672 248 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 ACVR1BP36896 505 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 GUCA1AP43080 201 aaPredicted RBP12.05□□□□□ -0.48
USF1-205ENST00000473969 MAGEA2P43356 314 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 OMPP47874 163 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 RPS4XP62701 263 aaKnown RBP12.05□□□□□ -0.48
USF1-205ENST00000473969 CBX1P83916 185 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 BSPH1Q075Z2 132 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 CD47Q08722 323 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 SEC23BQ15437 767 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 PHYHD1Q5SRE7 291 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 OR2T5Q6IEZ7 315 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 ZNF813Q6ZN06 617 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 ZNF704Q6ZNC4 412 aaPredicted RBP12.05□□□□□ -0.48
USF1-205ENST00000473969 IGFN1Q86VF2 1251 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 WDR31Q8NA23 367 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 SYT14Q8NB59 555 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 NOXO1Q8NFA2 376 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 OR2T29Q8NH02 315 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 FNDC8Q8TC99 324 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 BCL2L2Q92843 193 aaPredicted RBP12.05□□□□□ -0.48
USF1-205ENST00000473969 TMEM54Q969K7 222 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 BOD1Q96IK1 185 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 RSRC1Q96IZ7 334 aaKnown RBP12.05□□□□□ -0.48
USF1-205ENST00000473969 RADILQ96JH8 1075 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 RBP7Q96R05 134 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 FOXB1Q99853 325 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 KCNS3Q9BQ31 491 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 CHID1Q9BWS9 393 aa12.05□□□□□ -0.48
USF1-205ENST00000473969 ZNF346Q9UL40 294 aaKnown RBP12.05□□□□□ -0.48
USF1-205ENST00000473969 ARPC4-TTLL3A0A0A6YYG9 625 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 DHHO43323 396 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 CIB2O75838 187 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 FARS2O95363 451 aaKnown RBP12.04□□□□□ -0.48
USF1-205ENST00000473969 CST1P01037 141 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 RAF1P04049 648 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 QDPRP09417 244 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 PGA4P0DJD7 388 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 PGA3P0DJD8 388 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 HMGA2P52926 109 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 ERVK-25P63136 954 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 PIAS4Q8N2W9 510 aaPredicted RBP12.04□□□□□ -0.48
USF1-205ENST00000473969 CANT1Q8WVQ1 401 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 NINJ1Q92982 152 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 ZNF837Q96EG3 531 aaPredicted RBP12.04□□□□□ -0.48
USF1-205ENST00000473969 HS3ST6Q96QI5 342 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 PLEKHF2Q9H8W4 249 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 ST6GALNAC2Q9UJ37 374 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 POU2F3Q9UKI9 436 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 ITGB1BP2Q9UKP3 347 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 SAMHD1Q9Y3Z3 626 aaKnown RBP12.04□□□□□ -0.48
USF1-205ENST00000473969 LYVE1Q9Y5Y7 322 aa12.04□□□□□ -0.48
USF1-205ENST00000473969 DPRXA6NFQ7 191 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 ABCD4O14678 606 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 ARHGEF9O43307 516 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 SEC14L2O76054 403 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 IGHMP01871 453 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 CD14P08571 375 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 FPR3P25089 353 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 CD40P25942 277 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 LIMS1P48059 325 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 RPS6KA3P51812 740 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 MYBPC1Q00872 1141 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 GK3PQ14409 553 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 ARMC4Q5T2S8 1044 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 C1orf146Q5VVC0 180 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 SMARCD3Q6STE5 483 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 SLC22A25Q6T423 547 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 PAMR1Q6UXH9 720 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 C20orf204Q6ZNR8 217 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 ZER1Q7Z7L7 766 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 ADGRG5Q8IZF4 528 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 ARIH2OSQ8N7S6 290 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 LRRC75AQ8NAA5 344 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 FANK1Q8TC84 345 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 AKAP1Q92667 903 aaKnown RBP eCLIP12.03□□□□□ -0.48
USF1-205ENST00000473969 NRGNQ92686 78 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 MCHR2Q969V1 340 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 ZNF570Q96NI8 536 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 FUZQ9BT04 418 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 ALG12Q9BV10 488 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 KATNB1Q9BVA0 655 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 LRMDAQ9H2I8 198 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 KCNN2Q9H2S1 579 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 NPAP1Q9NZP6 1156 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 SLC7A8Q9UHI5 535 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms