RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 TGM3Q08188 693 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 C2orf54Q08AI8 447 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 NDUFA5Q16718 116 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 DGUOKQ16854 277 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 LIN52Q52LA3 116 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 SMUG1Q53HV7 270 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 EOGTQ5NDL2 527 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 CCDC122Q5T0U0 273 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 C17orf82Q86X59 251 aaPredicted RBP3.23□□□□□ -1.89
BRCA1-212ENST00000473961 VRK2Q86Y07 508 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF100Q8IYN0 542 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 GPD1LQ8N335 351 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 KLHL30-AS1Q8NEE0 82 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 OR1L6Q8NGR2 347 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 GPR151Q8TDV0 419 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 PYROXD1Q8WU10 500 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 TSEN15Q8WW01 171 aaKnown RBP3.23□□□□□ -1.89
BRCA1-212ENST00000473961 TLCD1Q96CP7 247 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 DGCR14Q96DF8 476 aaKnown RBP3.23□□□□□ -1.89
BRCA1-212ENST00000473961 PAGE5Q96GU1 130 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 CAPZA3Q96KX2 299 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 PGLYRP4Q96LB8 373 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 ATOH8Q96SQ7 321 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 FMO2Q99518 471 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 SIKE1Q9BRV8 207 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 NARFLQ9H6Q4 476 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 PTGES2Q9H7Z7 377 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 PARVBQ9HBI1 364 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 MRPL47Q9HD33 250 aaKnown RBP3.23□□□□□ -1.89
BRCA1-212ENST00000473961 SAMSN1Q9NSI8 373 aaKnown RBP3.23□□□□□ -1.89
BRCA1-212ENST00000473961 HOXC10Q9NYD6 342 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 TREM2Q9NZC2 230 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 SLC7A8Q9UHI5 535 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 KCNIP3Q9Y2W7 256 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 STARD10Q9Y365 291 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 CRYBG1Q9Y4K1 1723 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 HYOU1Q9Y4L1 999 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 PREX1Q8TCU6 1659 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 QRICH2Q9H0J4 1663 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 ARHGEF10O15013 1369 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 RAPGEF6Q8TEU7 1601 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ATP10BO94823 1461 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 CACNA1FO60840 1977 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 PLCH2O75038 1416 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 RIMS2Q9UQ26 1411 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 IGHV1OR21-1A0A087WYE8 117 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 SIGLEC16A6NMB1 481 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 CDH16O75309 829 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 SNAPINO95295 136 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 LCA5LO95447 670 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 CST1P01037 141 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 CGAP01215 116 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 FTH1P02794 183 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 GYPCP04921 128 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 C2P06681 752 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ANXA8P13928 327 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 CCNB1P14635 433 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 DDOSTP39656 456 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ACLYP53396 1101 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 CDH6P55285 790 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 C21orf59P57076 290 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 RPL26P61254 145 aaKnown RBP3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ERVK-25P63136 954 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 PPIDQ08752 370 aaKnown RBP3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ARFRP1Q13795 201 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 GK3PQ14409 553 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 GRB7Q14451 532 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ARHGAP19Q14CB8 494 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF77Q15935 545 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 NSUN5P1Q3KNT7 163 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 CCDC14Q49A88 953 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 BCL7AQ4VC05 210 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 MARCH8Q5T0T0 291 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ANXA8L1Q5VT79 327 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 RESP18Q5W5W9 173 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 LRRC66Q68CR7 880 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 TIGD3Q6B0B8 471 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 UQCC3Q6UW78 93 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 CXCL17Q6UXB2 119 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 Q6ZN92 141 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF571Q7Z3V5 609 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-212ENST00000473961 BIVMQ86UB2 503 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF589Q86UQ0 364 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-212ENST00000473961 SPATA24Q86W54 205 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 KRTAP7-1Q8IUC3 87 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 PSTKQ8IV42 348 aaKnown RBP3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ZBED8Q8IZ13 594 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ST13P4Q8IZP2 240 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-212ENST00000473961 TPRX1Q8N7U7 411 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 CATSPER1Q8NEC5 780 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 OR7G2Q8NG99 324 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 OR4K14Q8NGD5 310 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ZPLD1Q8TCW7 415 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 NAT14Q8WUY8 206 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 GTSF1Q8WW33 167 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 NOL4LQ96MY1 436 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-212ENST00000473961 RANBP9Q96S59 729 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 TBX15Q96SF7 602 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 KCTD14Q9BQ13 255 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-212ENST00000473961 DRC3Q9H069 523 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms