RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 THAP4Q8WY91 577 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 PGLYRP3Q96LB9 341 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 ADAD1Q96M93 576 aaKnown RBP5.59□□□□□ -1.52
CLK1-210ENST00000473565 ANGPTL4Q9BY76 406 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 MMP27Q9H306 513 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 PTGES2Q9H7Z7 377 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 CPNE5Q9HCH3 593 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 SH2D2AQ9NP31 389 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 HMG20AQ9NP66 347 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 CHST11Q9NPF2 352 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 ISYNA1Q9NPH2 558 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 CCDC59Q9P031 241 aaKnown RBP5.59□□□□□ -1.52
CLK1-210ENST00000473565 KLHL13Q9P2N7 655 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 B3GAT1Q9P2W7 334 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 ST6GALNAC2Q9UJ37 374 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 B9D1Q9UPM9 204 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 COA3Q9Y2R0 106 aaPredicted RBP5.59□□□□□ -1.52
CLK1-210ENST00000473565 MAP1BP46821 2468 aaKnown RBP5.58□□□□□ -1.52
CLK1-210ENST00000473565 TRDV1A0A1B0GX56 115 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 SLC22A23A1A5C7 686 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 HTR3EA5X5Y0 456 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 A6NL46 340 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 NPIPA5E9PKD4 350 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 TNFRSF10AO00220 468 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ZIC3O60481 467 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 DOK2O60496 412 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 SERPINA7P05543 415 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ITGA3P26006 1051 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 CALRP27797 417 aaKnown RBP5.58□□□□□ -1.52
CLK1-210ENST00000473565 SOX6P35712 828 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 BIDP55957 195 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ACTC1P68032 377 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ACTA1P68133 377 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 HSF1Q00613 529 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ACSM1Q08AH1 577 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 POU4F2Q12837 409 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 CAMK2DQ13557 499 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ZNF846Q147U1 533 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 CDONQ4KMG0 1287 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 SLC35D3Q5M8T2 416 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 TIGD3Q6B0B8 471 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 C3orf33Q6P1S2 294 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 CD200R1LQ6Q8B3 271 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 GDPGP1Q6ZNW5 385 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 FAM83FQ8NEG4 500 aaPredicted RBP5.58□□□□□ -1.52
CLK1-210ENST00000473565 OR2T4Q8NH00 348 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 THEM6Q8WUY1 208 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 NSMAFQ92636 917 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ZNF775Q96BV0 537 aaPredicted RBP5.58□□□□□ -1.52
CLK1-210ENST00000473565 NXF2Q9GZY0 626 aaKnown RBP5.58□□□□□ -1.52
CLK1-210ENST00000473565 SMURF1Q9HCE7 757 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 INPP5EQ9NRR6 644 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 SERINC1Q9NRX5 453 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 MRPL22Q9NWU5 206 aaKnown RBP5.58□□□□□ -1.52
CLK1-210ENST00000473565 STMN3Q9NZ72 180 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 PLEKHB1Q9UF11 243 aaPredicted RBP5.58□□□□□ -1.52
CLK1-210ENST00000473565 DKKL1Q9UK85 242 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 IKZF2Q9UKS7 526 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 NPIPA1Q9UND3 350 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 PCDHGA1Q9Y5H4 931 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 CACNA1GO43497 2377 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 A0A1W2PQ72 361 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 OR2M5A3KFT3 312 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ANKRD61A6NGH8 418 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 FAM47E-STBD1D6RA91 191 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 STMND1H3BQB6 276 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ETV2O00321 342 aaPredicted RBP5.58□□□□□ -1.52
CLK1-210ENST00000473565 SNPHO15079 494 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ZNF208O43345 1280 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 SNX4O95219 450 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 HLA-DPB1P04440 258 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 SPARCP09486 303 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 EDNRAP25101 427 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 AZGP1P25311 298 aaKnown RBP5.58□□□□□ -1.52
CLK1-210ENST00000473565 GDI2P50395 445 aaKnown RBP5.58□□□□□ -1.52
CLK1-210ENST00000473565 OR10A3P58181 314 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 EIF3IQ13347 325 aaKnown RBP5.58□□□□□ -1.52
CLK1-210ENST00000473565 SLC25A53Q5H9E4 307 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ZMAT1Q5H9K5 638 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 EMC4Q5J8M3 183 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 CEACAM19Q7Z692 300 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 UBQLNLQ8IYU4 475 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 DTX3Q8N9I9 347 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ABHD4Q8TB40 342 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ASB10Q8WXI3 467 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 NKD1Q969G9 470 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 RNF166Q96A37 237 aaPredicted RBP5.58□□□□□ -1.52
CLK1-210ENST00000473565 SLC25A46Q96AG3 418 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 FRMD6Q96NE9 622 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 DACH2Q96NX9 599 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 SIGLEC12Q96PQ1 595 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 UCN2Q96RP3 112 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ABCB10Q9NRK6 738 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 ALKBH4Q9NXW9 302 aa5.58□□□□□ -1.52
CLK1-210ENST00000473565 MRM2Q9UI43 246 aaKnown RBP5.58□□□□□ -1.52
CLK1-210ENST00000473565 IGLV1-36A0A0B4J1U3 117 aa5.57□□□□□ -1.52
CLK1-210ENST00000473565 TRBV2A0A0J9YWF9 115 aa5.57□□□□□ -1.52
CLK1-210ENST00000473565 ZNF593O00488 134 aaPredicted RBP5.57□□□□□ -1.52
CLK1-210ENST00000473565 SEC14L5O43304 696 aa5.57□□□□□ -1.52
CLK1-210ENST00000473565 TBX1O43435 398 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms