RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 SRSF4Q08170 494 aaKnown RBP8.18□□□□□ -1.1
MCF2L-223ENST00000473345 GSG1Q2KHT4 349 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 LIN52Q52LA3 116 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 KLF17Q5JT82 389 aaPredicted RBP8.18□□□□□ -1.1
MCF2L-223ENST00000473345 SHQ1Q6PI26 577 aaKnown RBP8.18□□□□□ -1.1
MCF2L-223ENST00000473345 ZNF813Q6ZN06 617 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 PEX5LQ8IYB4 626 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 ZNF440Q8IYI8 595 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 SIGLECL1Q8N7X8 197 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 SLC41A3Q96GZ6 507 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 SPATA9Q9BWV2 254 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 OR51B6Q9H340 312 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 MEAF6Q9HAF1 191 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 MOV10Q9HCE1 1003 aaKnown RBP8.18□□□□□ -1.1
MCF2L-223ENST00000473345 MMP26Q9NRE1 261 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 TAAR3PQ9P1P4 343 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 DUSP13Q9UII6 198 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 WIPI2Q9Y4P8 454 aa8.18□□□□□ -1.1
MCF2L-223ENST00000473345 IGLV3-9A0A075B6K5 115 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 LOC102725191A0A1B0GVB3 256 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 C17orf100A8MU93 164 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 PRSS23O95084 383 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 ERCC1P07992 297 aaPredicted RBP8.17□□□□□ -1.1
MCF2L-223ENST00000473345 KITP10721 976 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 LBPP18428 481 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 NCF2P19878 526 aaPredicted RBP8.17□□□□□ -1.1
MCF2L-223ENST00000473345 MAKP20794 623 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 IDH3AP50213 366 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 RAB1AP62820 205 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 MRPS11P82912 194 aaKnown RBP8.17□□□□□ -1.1
MCF2L-223ENST00000473345 GLO1Q04760 184 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 ZP4Q12836 540 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 FAM91A1Q658Y4 838 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 OGFOD2Q6N063 350 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 LRFN4Q6PJG9 635 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 H1FNTQ75WM6 255 aaPredicted RBP8.17□□□□□ -1.1
MCF2L-223ENST00000473345 TSPYL5Q86VY4 417 aaPredicted RBP8.17□□□□□ -1.1
MCF2L-223ENST00000473345 DEFB108BQ8NET1 73 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 OR9I1Q8NGQ6 314 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 THOC1Q96FV9 657 aaKnown RBP8.17□□□□□ -1.1
MCF2L-223ENST00000473345 OR52E6Q96RD3 313 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 EBF4Q9BQW3 602 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 TMEM120AQ9BXJ8 343 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 MYLK2Q9H1R3 596 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 MS4A5Q9H3V2 200 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 WDR55Q9H6Y2 383 aaPredicted RBP8.17□□□□□ -1.1
MCF2L-223ENST00000473345 CORINQ9Y5Q5 1042 aa8.17□□□□□ -1.1
MCF2L-223ENST00000473345 A0A087WUJ7 227 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 DNAJC9-AS1A6NH13 148 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 TRPC5OSA6NMA1 111 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 AIM2O14862 343 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 ZNF250P15622 560 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 PCMT1P22061 227 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 DSTNP60981 165 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 SEC61A1P61619 476 aaKnown RBP8.16□□□□□ -1.1
MCF2L-223ENST00000473345 C1DQ13901 141 aaKnown RBP8.16□□□□□ -1.1
MCF2L-223ENST00000473345 DPY19L1Q2PZI1 675 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 ZNF311Q5JNZ3 666 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 FAM69AQ5T7M9 428 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 METTL21CQ5VZV1 264 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 ACSM5Q6NUN0 579 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 UGT2A3Q6UWM9 527 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 TREML4Q6UXN2 200 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 USP51Q70EK9 711 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 JAZF1Q86VZ6 243 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 MSRB3Q8IXL7 192 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 PIK3C3Q8NEB9 887 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 VPS37AQ8NEZ2 397 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 IL17RDQ8NFM7 739 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 FOXB1Q99853 325 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 SH3GL3Q99963 347 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 CCDC28BQ9BUN5 200 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 TPT1P8Q9HAU6 139 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 HINT3Q9NQE9 182 aaKnown RBP8.16□□□□□ -1.1
MCF2L-223ENST00000473345 P2RX2Q9UBL9 471 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 ZNF69Q9UC07 566 aa8.16□□□□□ -1.1
MCF2L-223ENST00000473345 LEF1Q9UJU2 399 aaPredicted RBP8.16□□□□□ -1.1
MCF2L-223ENST00000473345 A0A096LPI6 279 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 A0A0G2JND7 137 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 A0A1W2PPW3 197 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 TRAPPC2LH3BP13 241 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 EBAG9O00559 213 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 SERPINI2O75830 405 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 DCTN3O75935 186 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 LYPD3O95274 346 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 THY1P04216 161 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 SERPINA5P05154 406 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 UQCRBP14927 111 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 EPHA3P29320 983 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 MPV17P39210 176 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 CRATP43155 626 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 CRYBB2P43320 205 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 LIMS1P48059 325 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 CLNS1AP54105 237 aaKnown RBP8.15□□□□□ -1.1
MCF2L-223ENST00000473345 COPZ1P61923 177 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 LCN2P80188 198 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 LRRC74AQ0VAA2 488 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 GNA13Q14344 377 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 ZSCAN26Q16670 478 aa8.15□□□□□ -1.1
MCF2L-223ENST00000473345 TSTQ16762 297 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms