RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 RLN3Q8WXF3 142 aa3.62□□□□□ -1.83
SGCE-210ENST00000472326 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.62□□□□□ -1.83
SGCE-210ENST00000472326 SYAP1Q96A49 352 aaPredicted RBP3.62□□□□□ -1.83
SGCE-210ENST00000472326 ZNF641Q96N77 438 aaPredicted RBP3.62□□□□□ -1.83
SGCE-210ENST00000472326 MS4A4EQ96PG1 132 aa3.62□□□□□ -1.83
SGCE-210ENST00000472326 MRPL47Q9HD33 250 aaKnown RBP3.62□□□□□ -1.83
SGCE-210ENST00000472326 PACSIN2Q9UNF0 486 aaPredicted RBP3.62□□□□□ -1.83
SGCE-210ENST00000472326 PIKFYVEQ9Y2I7 2098 aa3.62□□□□□ -1.83
SGCE-210ENST00000472326 MN1Q10571 1320 aaPredicted RBP3.62□□□□□ -1.83
SGCE-210ENST00000472326 KIF21BO75037 1637 aa3.62□□□□□ -1.83
SGCE-210ENST00000472326 PRDM2Q13029 1718 aa3.61□□□□□ -1.83
SGCE-210ENST00000472326 GRIN2BQ13224 1484 aa3.61□□□□□ -1.83
SGCE-210ENST00000472326 DNMBPQ6XZF7 1577 aa3.61□□□□□ -1.83
SGCE-210ENST00000472326 A0A1W2PP18 115 aa3.61□□□□□ -1.83
SGCE-210ENST00000472326 IGKV1-17P01599 117 aa3.61□□□□□ -1.83
SGCE-210ENST00000472326 PRPS2P11908 318 aa3.61□□□□□ -1.83
SGCE-210ENST00000472326 MUC1P15941 1255 aaPredicted RBP3.61□□□□□ -1.83
SGCE-210ENST00000472326 SLC7A9P82251 487 aa3.61□□□□□ -1.83
SGCE-210ENST00000472326 FAM92BQ6ZTR7 304 aa3.61□□□□□ -1.83
SGCE-210ENST00000472326 MED8Q96G25 268 aa3.61□□□□□ -1.83
SGCE-210ENST00000472326 OR2A5Q96R48 311 aa3.61□□□□□ -1.83
SGCE-210ENST00000472326 ZNF2Q9BSG1 426 aaPredicted RBP3.61□□□□□ -1.83
SGCE-210ENST00000472326 EXD2Q9NVH0 621 aa3.61□□□□□ -1.83
SGCE-210ENST00000472326 CGNQ9P2M7 1197 aaKnown RBP3.61□□□□□ -1.83
SGCE-210ENST00000472326 CD84Q9UIB8 345 aa3.61□□□□□ -1.83
SGCE-210ENST00000472326 PPRC1Q5VV67 1664 aaKnown RBP3.61□□□□□ -1.83
SGCE-210ENST00000472326 A0A1B0GVI7 797 aa3.6□□□□□ -1.83
SGCE-210ENST00000472326 INS-IGF2F8WCM5 200 aa3.6□□□□□ -1.83
SGCE-210ENST00000472326 TCN1P20061 433 aaPredicted RBP3.6□□□□□ -1.83
SGCE-210ENST00000472326 NPY1RP25929 384 aa3.6□□□□□ -1.83
SGCE-210ENST00000472326 RORAP35398 523 aa3.6□□□□□ -1.83
SGCE-210ENST00000472326 GPR6P46095 362 aaPredicted RBP3.6□□□□□ -1.83
SGCE-210ENST00000472326 SUB1P53999 127 aaKnown RBP eCLIP3.6□□□□□ -1.83
SGCE-210ENST00000472326 RPS21P63220 83 aaKnown RBP3.6□□□□□ -1.83
SGCE-210ENST00000472326 SCRN3Q0VDG4 424 aa3.6□□□□□ -1.83
SGCE-210ENST00000472326 UQCC3Q6UW78 93 aa3.6□□□□□ -1.83
SGCE-210ENST00000472326 DHDDSQ86SQ9 333 aa3.6□□□□□ -1.83
SGCE-210ENST00000472326 WFIKKN1Q96NZ8 548 aa3.6□□□□□ -1.83
SGCE-210ENST00000472326 MSH6P52701 1360 aa3.6□□□□□ -1.83
SGCE-210ENST00000472326 CEMIPQ8WUJ3 1361 aa3.6□□□□□ -1.83
SGCE-210ENST00000472326 SOGA1O94964 1423 aa3.6□□□□□ -1.83
SGCE-210ENST00000472326 POLA1P09884 1462 aaPredicted RBP3.6□□□□□ -1.83
SGCE-210ENST00000472326 TEX14Q8IWB6 1497 aa3.6□□□□□ -1.83
SGCE-210ENST00000472326 IGHV5-51A0A0C4DH38 117 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 IGHV3-66A0A0C4DH42 116 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 A0A0U1RQS6 177 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 UPK3AO75631 287 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 GAPDHP04406 335 aaKnown RBP3.59□□□□□ -1.83
SGCE-210ENST00000472326 CISD3P0C7P0 127 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 SMIM10L1P0DMW3 83 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 ZNF14P17017 642 aaPredicted RBP3.59□□□□□ -1.83
SGCE-210ENST00000472326 IRX3P78415 501 aaPredicted RBP3.59□□□□□ -1.83
SGCE-210ENST00000472326 TRIM40Q6P9F5 258 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 SLC25A34Q6PIV7 304 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 ENPP6Q6UWR7 440 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 C15orf56Q8N910 161 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 SMIM10Q96HG1 83 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 LINC00477Q96M19 166 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 TSSK3Q96PN8 268 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 ERP44Q9BS26 406 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 FAIM2Q9BWQ8 316 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 PARD6BQ9BYG5 372 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 ZDHHC4Q9NPG8 344 aa3.59□□□□□ -1.83
SGCE-210ENST00000472326 WDR97A6NE52 1622 aa3.59□□□□□ -1.84
SGCE-210ENST00000472326 ADCY10Q96PN6 1610 aa3.59□□□□□ -1.84
SGCE-210ENST00000472326 PCM1Q15154 2024 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 A0A1B0GVX0 72 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 BET1O15155 118 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 KMOO15229 486 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 GUCA1CO95843 209 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 GRIA1P42261 906 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 CCR8P51685 355 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 FGL1Q08830 312 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 ZNF836Q6ZNA1 936 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 H2AFVQ71UI9 128 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 STRADAQ7RTN6 431 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 HMGN2P46Q86SG4 172 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 TRIM69Q86WT6 500 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 PUSL1Q8N0Z8 303 aaKnown RBP3.58□□□□□ -1.84
SGCE-210ENST00000472326 STPG2Q8N412 459 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 MREGQ8N565 214 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 GMCL1P1Q8NEA9 526 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 TBC1D31Q96DN5 1066 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 MCCC2Q9HCC0 563 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 PRG4Q92954 1404 aaPredicted RBP3.58□□□□□ -1.84
SGCE-210ENST00000472326 IQSEC2Q5JU85 1478 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 ADAMTSL3P82987 1691 aa3.58□□□□□ -1.84
SGCE-210ENST00000472326 IGLV2-18A0A075B6J9 118 aa3.57□□□□□ -1.84
SGCE-210ENST00000472326 H0YHG0 523 aa3.57□□□□□ -1.84
SGCE-210ENST00000472326 RBBP9O75884 186 aa3.57□□□□□ -1.84
SGCE-210ENST00000472326 IGLV3-19P01714 112 aa3.57□□□□□ -1.84
SGCE-210ENST00000472326 UBTFL1P0CB47 393 aaPredicted RBP3.57□□□□□ -1.84
SGCE-210ENST00000472326 CCT3P49368 545 aaKnown RBP3.57□□□□□ -1.84
SGCE-210ENST00000472326 SHROOM2Q13796 1616 aa3.57□□□□□ -1.84
SGCE-210ENST00000472326 DGUOKQ16854 277 aa3.57□□□□□ -1.84
SGCE-210ENST00000472326 CCDC152Q4G0S7 254 aa3.57□□□□□ -1.84
SGCE-210ENST00000472326 Q6ZPB1 254 aaPredicted RBP3.57□□□□□ -1.84
SGCE-210ENST00000472326 PBRM1Q86U86 1689 aa3.57□□□□□ -1.84
SGCE-210ENST00000472326 SCFD1Q8WVM8 642 aa3.57□□□□□ -1.84
SGCE-210ENST00000472326 MADDQ8WXG6 1647 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms