RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 VWC2LB2RUY7 222 aa16.3■□□□□ 0.2
COMMD1-207ENST00000471704 HLA-HP01893 362 aa16.3■□□□□ 0.2
COMMD1-207ENST00000471704 MT-ND1P03886 318 aa16.3■□□□□ 0.2
COMMD1-207ENST00000471704 B4GALT1P15291 398 aa16.3■□□□□ 0.2
COMMD1-207ENST00000471704 SERPINF1P36955 418 aa16.3■□□□□ 0.2
COMMD1-207ENST00000471704 TAS2R41P59536 307 aa16.3■□□□□ 0.2
COMMD1-207ENST00000471704 LSM11P83369 360 aaKnown RBP eCLIP16.3■□□□□ 0.2
COMMD1-207ENST00000471704 CHRFAM7AQ494W8 412 aa16.3■□□□□ 0.2
COMMD1-207ENST00000471704 PODNL1Q6PEZ8 512 aa16.3■□□□□ 0.2
COMMD1-207ENST00000471704 OR6N1Q8NGY5 312 aa16.3■□□□□ 0.2
COMMD1-207ENST00000471704 OR6X1Q8NH79 312 aa16.3■□□□□ 0.2
COMMD1-207ENST00000471704 MS4A3Q96HJ5 214 aa16.3■□□□□ 0.2
COMMD1-207ENST00000471704 POLR2J2Q9GZM3 115 aaKnown RBP16.3■□□□□ 0.2
COMMD1-207ENST00000471704 POLR2J3Q9H1A7 115 aaKnown RBP16.3■□□□□ 0.2
COMMD1-207ENST00000471704 A4GNTQ9UNA3 340 aa16.3■□□□□ 0.2
COMMD1-207ENST00000471704 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.3■□□□□ 0.22e-12■■■■■ 46.8
COMMD1-207ENST00000471704 IGHV2OR16-5A0A0B4J2B6 119 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 RNF13O43567 381 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 PIP5K1CO60331 668 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 OR6A2O95222 327 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 TSPAN19P0C672 248 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 PGA4P0DJD7 388 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 PGA3P0DJD8 388 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 USF1P22415 310 aaPredicted RBP16.29■□□□□ 0.2
COMMD1-207ENST00000471704 ARR3P36575 388 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 RBM34P42696 430 aaKnown RBP16.29■□□□□ 0.2
COMMD1-207ENST00000471704 CSNK1A1P48729 337 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 SELENOWP63302 87 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 RUNX1T1Q06455 604 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 RPL18Q07020 188 aaKnown RBP16.29■□□□□ 0.2
COMMD1-207ENST00000471704 NPRL3Q12980 569 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 ZNF813Q6ZN06 617 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 VTCN1Q7Z7D3 282 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 NUP37Q8NFH4 326 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 FGFBP3Q8TAT2 258 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 TMEM239Q8WW34 195 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 TPD52L3Q96J77 140 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 SORCS2Q96PQ0 1159 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 FOXB1Q99853 325 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 KCNS3Q9BQ31 491 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 MOV10Q9HCE1 1003 aaKnown RBP16.29■□□□□ 0.2
COMMD1-207ENST00000471704 B3GAT2Q9NPZ5 323 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 TMEM160Q9NX00 188 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 SNX13Q9Y5W8 968 aa16.29■□□□□ 0.2
COMMD1-207ENST00000471704 PDE5AO76074 875 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 OR7A10O76100 309 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 IGF2P01344 180 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 IFNA2P01563 188 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 OR4A8P0C604 315 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 UMPSP11172 480 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 ZNF14P17017 642 aaPredicted RBP16.28■□□□□ 0.2
COMMD1-207ENST00000471704 FUT1P19526 365 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 CAPZA2P47755 286 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 SLC7A2P52569 658 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 SEC24CP53992 1094 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 LIPEQ05469 1076 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 PIGFQ07326 219 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 EFNB3Q15768 340 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 LRFN4Q6PJG9 635 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 VHLLQ6RSH7 139 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 NANOGNBQ7Z5D8 188 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 MYLK2Q9H1R3 596 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 GLTPQ9NZD2 209 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 POFUT2Q9Y2G5 429 aa16.28■□□□□ 0.2
COMMD1-207ENST00000471704 SVEP1Q4LDE5 3571 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 B9A039 149 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 BLOC1S5-TXNDC5H3BN57 136 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 J3KTA2 159 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 NDUFS8O00217 210 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 CCDC22O60826 627 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 IFNA14P01570 189 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 F13BP05160 661 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 FAM157CP0CG43 387 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 IGHV4-31P0DP07 118 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 THRBP10828 461 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 CD79AP11912 226 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 THBS4P35443 961 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 SNRPD2P62316 118 aaKnown RBP16.27■□□□□ 0.2
COMMD1-207ENST00000471704 HIST3H3Q16695 136 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 MSMPQ1L6U9 139 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 GSG1Q2KHT4 349 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 CYB5R2Q6BCY4 276 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 SPATA21Q7Z572 469 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 ARPINQ7Z6K5 226 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 CCDC36Q8IYA8 594 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 OR4F15Q8NGB8 312 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 MOSPD2Q8NHP6 518 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 LIPHQ8WWY8 451 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 SGTBQ96EQ0 304 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 SLC25A44Q96H78 314 aaPredicted RBP16.27■□□□□ 0.2
COMMD1-207ENST00000471704 PRRC1Q96M27 445 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 ELAC2Q9BQ52 826 aaKnown RBP16.27■□□□□ 0.2
COMMD1-207ENST00000471704 PLK3Q9H4B4 646 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 MAN2C1Q9NTJ4 1040 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 CDC42EP3Q9UKI2 254 aa16.27■□□□□ 0.2
COMMD1-207ENST00000471704 TMEM129A0AVI4 362 aa16.26■□□□□ 0.19
COMMD1-207ENST00000471704 FFAR1O14842 300 aa16.26■□□□□ 0.19
COMMD1-207ENST00000471704 ATP8B1O43520 1251 aa16.26■□□□□ 0.19
COMMD1-207ENST00000471704 IGFBP1P08833 259 aaPredicted RBP16.26■□□□□ 0.19
COMMD1-207ENST00000471704 PATE4P0C8F1 98 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms