RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 PAK5Q9P286 719 aa4.97□□□□□ -1.61
SMC5-202ENST00000471372 STK38LQ9Y2H1 464 aa4.97□□□□□ -1.61
SMC5-202ENST00000471372 LOC100653049A0A140TA62 436 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 ZNF99A8MXY4 864 aaPredicted RBP4.96□□□□□ -1.62
SMC5-202ENST00000471372 NDUFS8O00217 210 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 CDC7O00311 574 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 ZBTB5O15062 677 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 MRPS12O15235 138 aaKnown RBP4.96□□□□□ -1.62
SMC5-202ENST00000471372 MGRN1O60291 552 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 NEMFO60524 1076 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 KRT34O76011 436 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 IGHV3-23P01764 117 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 ACSM4P0C7M7 580 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 PTNP21246 168 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 CD82P27701 267 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 BTCP35070 178 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 GLP1RP43220 463 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 BTDP43251 543 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 ATP6AP1Q15904 470 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 MRGPRG-AS1Q2M3A8 158 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 PRR30Q53SZ7 412 aaPredicted RBP4.96□□□□□ -1.62
SMC5-202ENST00000471372 ZNF658Q5TYW1 1059 aaPredicted RBP4.96□□□□□ -1.62
SMC5-202ENST00000471372 RNLSQ5VYX0 342 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 STUMQ69YW2 141 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 CNIH2Q6PI25 160 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 HSD17B13Q7Z5P4 300 aaPredicted RBP4.96□□□□□ -1.62
SMC5-202ENST00000471372 CMTM8Q8IZV2 173 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 PRELID2Q8N945 189 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 OR56A4Q8NGH8 313 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 CA5BP1Q8WTZ4 195 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 ACOT11Q8WXI4 607 aaPredicted RBP4.96□□□□□ -1.62
SMC5-202ENST00000471372 OR1E3Q8WZA6 343 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 RAB1CQ92928 201 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 KCTD14Q9BQ13 255 aaPredicted RBP4.96□□□□□ -1.62
SMC5-202ENST00000471372 CNPY3Q9BT09 278 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 GFRA4Q9GZZ7 299 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 PTGES2Q9H7Z7 377 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 MRPL47Q9HD33 250 aaKnown RBP4.96□□□□□ -1.62
SMC5-202ENST00000471372 MYOZ2Q9NPC6 264 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 LZTFL1Q9NQ48 299 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 HRASLS2Q9NWW9 162 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 CFAP45Q9UL16 551 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 ING4Q9UNL4 249 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 CDH10Q9Y6N8 788 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 UBN2Q6ZU65 1347 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 FANCIQ9NVI1 1328 aa4.96□□□□□ -1.62
SMC5-202ENST00000471372 RLFQ13129 1914 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 A0A1B0GUH1 482 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 PRSS37A4D1T9 235 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 USP27XA6NNY8 438 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 C12orf77C9JDV5 145 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 AGPAT2O15120 278 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 ZNF780AO75290 641 aaPredicted RBP4.95□□□□□ -1.62
SMC5-202ENST00000471372 SNAI1O95863 264 aaPredicted RBP4.95□□□□□ -1.62
SMC5-202ENST00000471372 IFNW1P05000 195 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 SHC1P29353 583 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 AQP2P41181 271 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 GPR6P46095 362 aaPredicted RBP4.95□□□□□ -1.62
SMC5-202ENST00000471372 CLDN18P56856 261 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 GPR157Q5UAW9 335 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 GFI1BQ5VTD9 330 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 TTC23LQ6PF05 361 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 ZNF620Q6ZNG0 422 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 HDDC2Q7Z4H3 204 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 SLC39A11Q8N1S5 342 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 JAGN1Q8N5M9 183 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 CSGALNACT2Q8N6G5 542 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 OR5T3Q8NGG3 340 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 OR51S1Q8NGJ8 323 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 SPATA3Q8NHX4 192 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 MITD1Q8WV92 249 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 ECHDC3Q96DC8 303 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 OR5B12Q96R08 314 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 PAXXQ9BUH6 204 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 AGPAT3Q9NRZ7 376 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 Q9UF83 564 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 PHF3Q92576 2039 aaKnown RBP4.95□□□□□ -1.62
SMC5-202ENST00000471372 NEURL4Q96JN8 1562 aa4.95□□□□□ -1.62
SMC5-202ENST00000471372 MSH6P52701 1360 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 GLYATL1P3A0A0U1RQE8 302 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 NVLO15381 856 aaKnown RBP4.94□□□□□ -1.62
SMC5-202ENST00000471372 EIF3GO75821 320 aaKnown RBP eCLIP4.94□□□□□ -1.62
SMC5-202ENST00000471372 SNAPINO95295 136 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 FGFR1OPO95684 399 aaKnown RBP4.94□□□□□ -1.62
SMC5-202ENST00000471372 HLA-HP01893 362 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 GIG44P09565 113 aaPredicted RBP4.94□□□□□ -1.62
SMC5-202ENST00000471372 CCDC172P0C7W6 258 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 FOLR1P15328 257 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 NBL1P41271 181 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 ECH1Q13011 328 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 SF3A2Q15428 464 aaKnown RBP4.94□□□□□ -1.62
SMC5-202ENST00000471372 STK11Q15831 433 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 ZNF829Q3KNS6 432 aaPredicted RBP4.94□□□□□ -1.62
SMC5-202ENST00000471372 MARC1Q5VT66 337 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 MLIPQ5VWP3 458 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 PAMR1Q6UXH9 720 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 FAM122BQ7Z309 247 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 CMC1Q7Z7K0 106 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 OR4A15Q8NGL6 344 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 OR8K3Q8NH51 312 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms