RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 RPL3LQ92901 407 aaKnown RBP8.4□□□□□ -1.06
VPS52-216ENST00000471309 ZHX1-C8orf76Q96EF9 292 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 OXGR1Q96P68 337 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 TSSK2Q96PF2 358 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 KCNK17Q96T54 332 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 MYCBPQ99417 103 aaPredicted RBP8.4□□□□□ -1.06
VPS52-216ENST00000471309 MNTQ99583 582 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 TIMP4Q99727 224 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 HES7Q9BYE0 225 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 TTTY12Q9BZ98 90 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 NUAK2Q9H093 628 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 TSPAN10Q9H1Z9 355 aaPredicted RBP8.4□□□□□ -1.06
VPS52-216ENST00000471309 CXorf56Q9H5V9 222 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 MARCH7Q9H992 704 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 QPCTLQ9NXS2 382 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 KLHL13Q9P2N7 655 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 RASD1Q9Y272 281 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 WDFY3Q8IZQ1 3526 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 KIAA1549Q9HCM3 1950 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 A0A0J9YW62 118 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 A0A1W2PQL4 384 aaPredicted RBP8.39□□□□□ -1.07
VPS52-216ENST00000471309 ZNF814B7Z6K7 855 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 SELENOFO60613 162 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 TRAPPC6AO75865 159 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 MT-ND5P03915 603 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 POU3F2P20265 443 aaPredicted RBP8.39□□□□□ -1.07
VPS52-216ENST00000471309 NR4A1P22736 598 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 PSMA1P25786 263 aaKnown RBP8.39□□□□□ -1.07
VPS52-216ENST00000471309 CRABP1P29762 137 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 AGFG1P52594 562 aaKnown RBP8.39□□□□□ -1.07
VPS52-216ENST00000471309 TAS2R43P59537 309 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 NCS1P62166 190 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 ARG2P78540 354 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 LSAMPQ13449 338 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 SPCS2Q15005 226 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 CDONQ4KMG0 1287 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 GDPGP1Q6ZNW5 385 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 ESPNLQ6ZVH7 1005 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 GALNTL5Q7Z4T8 443 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 EGFL6Q8IUX8 553 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 TIGD4Q8IY51 512 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 SYS1Q8N2H4 156 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 KDM8Q8N371 416 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 RFLNBQ8N5W9 214 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 ZFP62Q8NB50 900 aaPredicted RBP8.39□□□□□ -1.07
VPS52-216ENST00000471309 NOXO1Q8NFA2 376 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 FDCSPQ8NFU4 85 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 GATAD2BQ8WXI9 593 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 MRPL48Q96GC5 212 aaKnown RBP8.39□□□□□ -1.07
VPS52-216ENST00000471309 ADGRG7Q96K78 797 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 ADAD1Q96M93 576 aaKnown RBP8.39□□□□□ -1.07
VPS52-216ENST00000471309 TBX5Q99593 518 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 NAA11Q9BSU3 229 aaPredicted RBP8.39□□□□□ -1.07
VPS52-216ENST00000471309 DCUN1D5Q9BTE7 237 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 SRA1Q9HD15 236 aaKnown RBP8.39□□□□□ -1.07
VPS52-216ENST00000471309 TRIM36Q9NQ86 728 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 MED29Q9NX70 200 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 BABAM2Q9NXR7 383 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 B9D1Q9UPM9 204 aa8.39□□□□□ -1.07
VPS52-216ENST00000471309 GVINP1Q7Z2Y8 2422 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 CENPBD1B2RD01 187 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 ZNF670-ZNF695F2Z2N8 137 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 ACOT7O00154 380 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 EIF1AYO14602 144 aaKnown RBP8.38□□□□□ -1.07
VPS52-216ENST00000471309 TNFSF11O14788 317 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 PHYHO14832 338 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 SLC16A7O60669 478 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 LALBAP00709 142 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 PGA4P0DJD7 388 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 PGA3P0DJD8 388 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 NR2C1P13056 603 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 CTLA4P16410 223 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 ZNF182P17025 639 aaPredicted RBP8.38□□□□□ -1.07
VPS52-216ENST00000471309 ZNF43P17038 809 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 GABRA5P31644 462 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 UGT2B10P36537 528 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 MAGEA5P43359 124 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 TNFSF10P50591 281 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 BIDP55957 195 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 CLDN20P56880 219 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 RAC3P60763 192 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 VBP1P61758 197 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 PLGLB1Q02325 96 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 GLO1Q04760 184 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 RUNX1T1Q06455 604 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 GPR50Q13585 617 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 DEFB109BQ30KR1 87 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 ZNF766Q5HY98 468 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 LIPKQ5VXJ0 399 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 HBMQ6B0K9 141 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 TMEM225Q6GV28 225 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 LYPD4Q6UWN0 246 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 USP43Q70EL4 1123 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 VASH1Q7L8A9 365 aaPredicted RBP8.38□□□□□ -1.07
VPS52-216ENST00000471309 SSX6Q7RTT6 188 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 GPAT4Q86UL3 456 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 SLC22A16Q86VW1 577 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 CDC20BQ86Y33 519 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 FAM109AQ8N4B1 249 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 TMEM251Q8N6I4 163 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms