RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 HSPA12AO43301 675 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 GPR32O75388 356 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 RDH16O75452 317 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 ZNF821O75541 412 aaPredicted RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 CRTAPO75718 401 aaPredicted RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 B3GAT3O94766 335 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 TSPAN15O95858 294 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 CD74P04233 296 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 LGALS2P05162 132 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 CHRM4P08173 479 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 CSF1P09603 554 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 FURINP09958 794 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 OR13C7P0DN81 318 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 CLUP10909 449 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 SLC2A1P11166 492 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 CD79AP11912 226 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 TMEM11P17152 192 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 SRMP19623 302 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 CR2P20023 1033 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 MAOAP21397 527 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 FGF7P21781 194 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 EDNRBP24530 442 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 PTGER1P34995 402 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 SERPINF1P36955 418 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 YBEYP58557 167 aaPredicted RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 FKBP1AP62942 108 aaKnown RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 GLO1Q04760 184 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 ARHGAP1Q07960 439 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 DHRS2Q13268 280 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 FZD5Q13467 585 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 BATFQ16520 125 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 UPP1Q16831 310 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 NKPD1Q17RQ9 610 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 OR2T2Q6IF00 324 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 STEAP1BQ6NZ63 245 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 LANCL3Q6ZV70 420 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 THOC6Q86W42 341 aaKnown RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 ZNF280BQ86YH2 543 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 FAM219AQ8IW50 185 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 PRR18Q8N4B5 295 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 MORN4Q8NDC4 146 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 RAB24Q969Q5 203 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 DNAJA3Q96EY1 480 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 PRRC1Q96M27 445 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 PACRGQ96M98 296 aaPredicted RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 NDUFAF3Q9BU61 184 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 POTEKPQ9BYX7 375 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 SYT4Q9H2B2 425 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 CCDC86Q9H6F5 360 aaKnown RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 KCNJ16Q9NPI9 418 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 LANCL2Q9NS86 450 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 TAS2R8Q9NYW2 309 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 OR14J1Q9UGF5 321 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 AMDHD2Q9Y303 409 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 ADAM18Q9Y3Q7 739 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 ATG4BQ9Y4P1 393 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 WIF1Q9Y5W5 379 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 V9GY05 133 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 TDRD15B5MCY1 1934 aaKnown RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 RALGAPA2Q2PPJ7 1873 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 TRAV1-2A0A0B4J238 106 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 A6NNC1 897 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 F5H5T6 163 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 HYAL3O43820 417 aaPredicted RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 MTX2O75431 263 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 CLDN7O95471 211 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 AK1P00568 194 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 MAS1P04201 325 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 SOD3P08294 240 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 RAB40ALP0C0E4 278 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 OR4Q2P0C623 313 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 NT5EP21589 574 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 CD200P41217 278 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 NAA10P41227 235 aaPredicted RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 LPAR6P43657 344 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 DVL1P1P54792 670 aaPredicted RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 HGFACQ04756 655 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 EIF2B1Q14232 305 aaKnown RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 SSPNQ14714 243 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 NFATC4Q14934 902 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 EBPQ15125 230 aaKnown RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 RHEBQ15382 184 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 ZNF750Q32MQ0 723 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 GGNBP1Q5YKI7 109 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 EIF5AL1Q6IS14 154 aaKnown RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 CD300LDQ6UXZ3 194 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 ZNF836Q6ZNA1 936 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 FRRS1Q6ZNA5 592 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 Q6ZRG5 221 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 PXKQ7Z7A4 578 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 COMTD1Q86VU5 262 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 VRK3Q8IV63 474 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 APCDD1Q8J025 514 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 GALNT16Q8N428 558 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 C19orf47Q8N9M1 422 aaKnown RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 CHST13Q8NET6 341 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 OR10AD1Q8NGE0 317 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 OR1J1Q8NGS3 322 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 GPR148Q8TDV2 347 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 C16orf78Q8WTQ4 265 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms