RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 EQTNQ9NQ60 294 aa8.74□□□□□ -1.01
HDAC3-205ENST00000469550 C20orf141Q9NUB4 165 aa8.74□□□□□ -1.01
HDAC3-205ENST00000469550 C14orf105Q9NVL8 296 aa8.74□□□□□ -1.01
HDAC3-205ENST00000469550 KLK11Q9UBX7 282 aa8.74□□□□□ -1.01
HDAC3-205ENST00000469550 MED31Q9Y3C7 131 aa8.74□□□□□ -1.01
HDAC3-205ENST00000469550 ETV7Q9Y603 341 aa8.74□□□□□ -1.01
HDAC3-205ENST00000469550 ZNF780BQ9Y6R6 833 aa8.74□□□□□ -1.01
HDAC3-205ENST00000469550 LRP4O75096 1905 aa8.74□□□□□ -1.01
HDAC3-205ENST00000469550 LAMA5O15230 3695 aa8.74□□□□□ -1.01
HDAC3-205ENST00000469550 IGKV1-8A0A0C4DH67 115 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 TRBV2A0A0J9YWF9 115 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 A0A1W2PPK0 400 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 F5H5P2 479 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 RPS4Y1P22090 263 aaKnown RBP8.73□□□□□ -1.01
HDAC3-205ENST00000469550 MPGP29372 298 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 PTGER1P34995 402 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 CBX5P45973 191 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 SCAND1P57086 179 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 GABREP78334 506 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 RBMS2Q15434 407 aaKnown RBP8.73□□□□□ -1.01
HDAC3-205ENST00000469550 OR1Q1Q15612 314 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 ISXQ2M1V0 245 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 TP53I3Q53FA7 332 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 TMEM69Q5SWH9 247 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 C18orf63Q68DL7 685 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 PWWP2BQ6NUJ5 590 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 PCSK4Q6UW60 755 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 NHLRC1Q6VVB1 395 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 FCRLAQ7L513 359 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 LINC01555Q8NAE3 123 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 PXT1Q8NFP0 134 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 OR9A2Q8NGT5 310 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 LILRB1Q8NHL6 650 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-205ENST00000469550 PFN4Q8NHR9 129 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 IFI44Q8TCB0 444 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 MIB2Q96AX9 1013 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 PEX11GQ96HA9 241 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 COX14Q96I36 57 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 MS4A4EQ96PG1 132 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 DMRTA2Q96SC8 542 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 TAS2R8Q9NYW2 309 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 PURGQ9UJV8 347 aaKnown RBP8.73□□□□□ -1.01
HDAC3-205ENST00000469550 V9GY05 133 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 GCN1Q92616 2671 aaKnown RBP8.73□□□□□ -1.01
HDAC3-205ENST00000469550 POM121CA8CG34 1229 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 PIN1P1O15428 100 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 ERI3O43414 337 aaKnown RBP8.73□□□□□ -1.01
HDAC3-205ENST00000469550 PRAMEF2O60811 474 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 CDC123O75794 336 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-205ENST00000469550 PAK4O96013 591 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-205ENST00000469550 APOC3P02656 99 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 DBIP07108 87 aaKnown RBP8.73□□□□□ -1.01
HDAC3-205ENST00000469550 UBBP0CG47 229 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 UBCP0CG48 685 aaKnown RBP8.73□□□□□ -1.01
HDAC3-205ENST00000469550 C8orf89P0DMQ9 161 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 C6P13671 934 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 FUT1P19526 365 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 HTR2AP28223 471 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 SLC6A6P31641 620 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 ART1P52961 327 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 H2BFSP57053 126 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 TMPRSS3P57727 454 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 YPEL5P62699 121 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 RPS27AP62979 156 aaKnown RBP8.73□□□□□ -1.01
HDAC3-205ENST00000469550 UBA52P62987 128 aaKnown RBP8.73□□□□□ -1.01
HDAC3-205ENST00000469550 S100A12P80511 92 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 CBFBQ13951 182 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 AMZ1Q400G9 498 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 PDSS1Q5T2R2 415 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 ATRAIDQ6UW56 229 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 TMEM17Q86X19 198 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 NRROSQ86YC3 692 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 SLC16A11Q8NCK7 471 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 OR2AK2Q8NG84 335 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 OR13C2Q8NGS9 318 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 OR2A1Q8NGT9 310 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 PMM1Q92871 262 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 CNN2Q99439 309 aaKnown RBP8.73□□□□□ -1.01
HDAC3-205ENST00000469550 MCCC2Q9HCC0 563 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 NOX4Q9NPH5 578 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 HPF1Q9NWY4 346 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 SLC6A5Q9Y345 797 aa8.73□□□□□ -1.01
HDAC3-205ENST00000469550 MDC1Q14676 2089 aaKnown RBP8.72□□□□□ -1.01
HDAC3-205ENST00000469550 LRRK1Q38SD2 2015 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 RFPL4AA6NLU0 287 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 C4orf51C9J302 202 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 RFPL4AL1F8VTS6 287 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 PYCARD-AS1I3L0S3 204 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 NUPL2O15504 423 aaKnown RBP8.72□□□□□ -1.01
HDAC3-205ENST00000469550 CTNSO60931 367 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 VSIG10L2P0DP72 767 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 CLUP10909 449 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 NID1P14543 1247 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 MGMTP16455 207 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 DCTDP32321 178 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 BCL6P41182 706 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 FGL1Q08830 312 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 STX4Q12846 297 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 SGCGQ13326 291 aa8.72□□□□□ -1.01
HDAC3-205ENST00000469550 NR0B2Q15466 257 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms