RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 NOXO1Q8NFA2 376 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 OR52E2Q8NGJ4 325 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 OR8D4Q8NGM9 314 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 OR6K3Q8NGY3 331 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 OR6X1Q8NH79 312 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 FNDC8Q8TC99 324 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 ASB10Q8WXI3 467 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 TMEM45BQ96B21 275 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF775Q96BV0 537 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 RASD2Q96D21 266 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 Q96M85 177 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 TSPAN32Q96QS1 320 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 VKORC1Q9BQB6 163 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 TTYH2Q9BSA4 534 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 EMC6Q9BV81 110 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 SFXN3Q9BWM7 321 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 ULBP2Q9BZM5 246 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 RERGLQ9H628 205 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 BCO1Q9HAY6 547 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 NRIP3Q9NQ35 241 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 H2AFY2Q9P0M6 372 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 B3GAT1Q9P2W7 334 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF346Q9UL40 294 aaKnown RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 PROCRQ9UNN8 238 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 MEMO1Q9Y316 297 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 FAM215AQ9Y5M1 114 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 SLC35F4A4IF30 521 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 SNTNA6NMZ2 147 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 ZAR1LA6NP61 321 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF587BE7ETH6 402 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 PRR23D1E9PI22 279 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-216ENST00000468949 H0YAE9 185 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 H7C1C5 153 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 BHLHE40O14503 412 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 ARPC3O15145 178 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 STSP08842 583 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 TSPAN19P0C672 248 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 PRR23D2P0DMB1 279 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-216ENST00000468949 GLI4P10075 376 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 ACADSP16219 412 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 HIST1H1CP16403 213 aaKnown RBP7.21□□□□□ -1.26
HDAC6-216ENST00000468949 CTSSP25774 331 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 HOXC12P31275 282 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 GGT2P36268 569 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 GIPRP48546 466 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 PCYT1AP49585 367 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF84P51523 738 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 FXYD6P3P58550 94 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 RPS7P62081 194 aaKnown RBP7.21□□□□□ -1.26
HDAC6-216ENST00000468949 LCN6P62502 163 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 CDK5Q00535 292 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 LGALS3BPQ08380 585 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 IL18R1Q13478 541 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 C6orf52Q5T4I8 152 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 LCN1P1Q5VSP4 162 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 SLX4IPQ5VYV7 408 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 PTCHD4Q6ZW05 846 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 VASH1Q7L8A9 365 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-216ENST00000468949 ARIH2OSQ8N7S6 290 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 POMGNT2Q8NAT1 580 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 SYT14Q8NB59 555 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 PROKR2Q8NFJ6 384 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 OR4Q3Q8NH05 313 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 OR4K13Q8NH42 304 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 SSC4DQ8WTU2 575 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 LRRC46Q96FV0 321 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 SLC25A44Q96H78 314 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-216ENST00000468949 HRASLS5Q96KN8 279 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF385AQ96PM9 386 aaKnown RBP7.21□□□□□ -1.26
HDAC6-216ENST00000468949 ALKBH3Q96Q83 286 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-216ENST00000468949 RBP7Q96R05 134 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 OR2M2Q96R28 347 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 MBOAT4Q96T53 435 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 ALG12Q9BV10 488 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 GRIP2Q9C0E4 1043 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 SLCO5A1Q9H2Y9 848 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 CMC2Q9NRP2 79 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 FAM118AQ9NWS6 357 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 RAB26Q9ULW5 256 aa7.21□□□□□ -1.26
HDAC6-216ENST00000468949 PCNX3Q9H6A9 2034 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 A0A1W2PPL8 197 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 PRSS37A4D1T9 235 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 CENPBD1B2RD01 187 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 KDM4EB2RXH2 506 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-216ENST00000468949 SURF4O15260 269 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 TLX2O43763 284 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-216ENST00000468949 AHCYL1O43865 530 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 TRMUO75648 421 aaKnown RBP7.2□□□□□ -1.26
HDAC6-216ENST00000468949 TXNDC12O95881 172 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 HLA-DQA2P01906 255 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 TP53P04637 393 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-216ENST00000468949 BMP5P22003 454 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 CRABP1P29762 137 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 POLR2IP36954 125 aaKnown RBP7.2□□□□□ -1.26
HDAC6-216ENST00000468949 SELENOPP49908 381 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 SRSF1Q07955 248 aaKnown RBP eCLIP7.2□□□□□ -1.26
HDAC6-216ENST00000468949 FHL1Q13642 323 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 C4orf17Q53FE4 359 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 KLHL12Q53G59 568 aa7.2□□□□□ -1.26
HDAC6-216ENST00000468949 OXLD1Q5BKU9 147 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms