RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 NPRL3Q12980 569 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 ADIPOQQ15848 244 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 GSG1Q2KHT4 349 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 SLC35D2Q76EJ3 337 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 MDP1Q86V88 176 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 TSPYL5Q86VY4 417 aaPredicted RBP16.56■□□□□ 0.24
COL7A1-207ENST00000467985 ZNF525Q8N782 197 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 HTRA1Q92743 480 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 B3GNT2Q9NY97 397 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 TAS2R5Q9NYW4 299 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 FBXL3Q9UKT7 428 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 IGHV2OR16-5A0A0B4J2B6 119 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 FAM220BPB1ANY3 271 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 SEC14L2O76054 403 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 UBOX5O94941 541 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 OR5F1O95221 314 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 IGF2P01344 180 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 CELA3BP08861 270 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 ASAH2BP0C7U1 165 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 THRBP10828 461 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 UMPSP11172 480 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 CALB2P22676 271 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 TAS2R41P59536 307 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 LOXL1Q08397 574 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-207ENST00000467985 SLC46A3Q7Z3Q1 461 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 PIWIL3Q7Z3Z3 882 aaKnown RBP16.55■□□□□ 0.24
COL7A1-207ENST00000467985 NANOGNBQ7Z5D8 188 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 ARPINQ7Z6K5 226 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 OR2T12Q8NG77 320 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 C10orf105Q8TEF2 133 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 ZNF566Q969W8 418 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 SLC25A44Q96H78 314 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-207ENST00000467985 FOXB1Q99853 325 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 PRSS27Q9BQR3 290 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 PLK3Q9H4B4 646 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 SEC61A2Q9H9S3 476 aa16.55■□□□□ 0.24
COL7A1-207ENST00000467985 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-207ENST00000467985 ZNF503-AS2A6NEH8 195 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 EBAG9O00559 213 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 CRLF1O75462 422 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 HLA-HP01893 362 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 MT-ND1P03886 318 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 CD79AP11912 226 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 NPR2P20594 1047 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 KDELR2P33947 212 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 HGFACQ04756 655 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 CYBRD1Q53TN4 286 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 VHLLQ6RSH7 139 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 DEF8Q6ZN54 512 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 HDDC2Q7Z4H3 204 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 MYPOPQ86VE0 399 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-207ENST00000467985 LRRC17Q8N6Y2 441 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 TMEM54Q969K7 222 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 TNFRSF13CQ96RJ3 184 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 MYOZ1Q9NP98 299 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-207ENST00000467985 NDE1Q9NXR1 346 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 GLTPQ9NZD2 209 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 RIMS3Q9UJD0 308 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 SPEF1Q9Y4P9 236 aa16.54■□□□□ 0.24
COL7A1-207ENST00000467985 A0A096LNT2 108 aa16.53■□□□□ 0.24
COL7A1-207ENST00000467985 NDUFS8O00217 210 aa16.53■□□□□ 0.24
COL7A1-207ENST00000467985 UBL3O95164 117 aa16.53■□□□□ 0.24
COL7A1-207ENST00000467985 RAB36O95755 333 aa16.53■□□□□ 0.24
COL7A1-207ENST00000467985 BCL10O95999 233 aa16.53■□□□□ 0.24
COL7A1-207ENST00000467985 ERCC1P07992 297 aaPredicted RBP16.53■□□□□ 0.24
COL7A1-207ENST00000467985 B4GALT1P15291 398 aa16.53■□□□□ 0.24
COL7A1-207ENST00000467985 IFNA8P32881 189 aa16.53■□□□□ 0.24
COL7A1-207ENST00000467985 PPOXP50336 477 aa16.53■□□□□ 0.24
COL7A1-207ENST00000467985 LRRC23Q53EV4 343 aaPredicted RBP16.53■□□□□ 0.24
COL7A1-207ENST00000467985 WDFY1Q8IWB7 410 aa16.53■□□□□ 0.24
COL7A1-207ENST00000467985 MICU2Q8IYU8 434 aa16.53■□□□□ 0.24
COL7A1-207ENST00000467985 TMEM239Q8WW34 195 aa16.53■□□□□ 0.24
COL7A1-207ENST00000467985 LZICQ8WZA0 190 aa16.53■□□□□ 0.24
COL7A1-207ENST00000467985 VRK1Q99986 396 aaPredicted RBP16.53■□□□□ 0.24
COL7A1-207ENST00000467985 MEPEQ9NQ76 525 aaPredicted RBP16.53■□□□□ 0.24
COL7A1-207ENST00000467985 COL6A5A8TX70 2615 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 A0A1W2PRG6 482 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 ELOVL7A1L3X0 281 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 HTR3EA5X5Y0 456 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 BLOC1S5-TXNDC5H3BN57 136 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 ZNF14P17017 642 aaPredicted RBP16.52■□□□□ 0.24
COL7A1-207ENST00000467985 TNFRSF1BP20333 461 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 THBS4P35443 961 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 PDLIM4P50479 330 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 PIN1Q13526 163 aaPredicted RBP16.52■□□□□ 0.24
COL7A1-207ENST00000467985 DAG1Q14118 895 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 C16orf89Q6UX73 402 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 CCDC121Q6ZUS5 278 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 TMEM255BQ8WV15 326 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 SGTBQ96EQ0 304 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 SORCS2Q96PQ0 1159 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 RAB1BQ9H0U4 201 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 NOX3Q9HBY0 568 aa16.52■□□□□ 0.24
COL7A1-207ENST00000467985 B2RBV5 119 aa16.51■□□□□ 0.23
COL7A1-207ENST00000467985 CENPBD1B2RD01 187 aa16.51■□□□□ 0.23
COL7A1-207ENST00000467985 hCG_2039718K7EN88 272 aa16.51■□□□□ 0.23
COL7A1-207ENST00000467985 OR7A10O76100 309 aa16.51■□□□□ 0.23
COL7A1-207ENST00000467985 IGHG1P01857 330 aa16.51■□□□□ 0.23
COL7A1-207ENST00000467985 FUT1P19526 365 aa16.51■□□□□ 0.23
COL7A1-207ENST00000467985 NR4A1P22736 598 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms