RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 P0C879 139 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 RBMY1A1P0DJD3 496 aaKnown RBP3.03□□□□□ -1.92
SMC4-208ENST00000467468 BCKDHBP21953 392 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 TUBG1P23258 451 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 CD1BP29016 333 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 GPR6P46095 362 aaPredicted RBP3.03□□□□□ -1.92
SMC4-208ENST00000467468 RGRP47804 291 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 UGT2B15P54855 530 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 DIO3P55073 304 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 IRX3P78415 501 aaPredicted RBP3.03□□□□□ -1.92
SMC4-208ENST00000467468 TGFBR3Q03167 851 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 PDIA2Q13087 525 aaKnown RBP3.03□□□□□ -1.92
SMC4-208ENST00000467468 TMED1Q13445 227 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 CYTH1Q15438 398 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 NKAIN1Q4KMZ8 207 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 BEX5Q5H9J7 111 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 PPM1LQ5SGD2 360 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 TMEM135Q86UB9 458 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 ZNF100Q8IYN0 542 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 PUSL1Q8N0Z8 303 aaKnown RBP3.03□□□□□ -1.92
SMC4-208ENST00000467468 BBS1Q8NFJ9 593 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 OR9G4Q8NGQ1 327 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 DTX3LQ8TDB6 740 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 C7orf33Q8WU49 177 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 ZNF707Q96C28 371 aaPredicted RBP3.03□□□□□ -1.92
SMC4-208ENST00000467468 XPO6Q96QU8 1125 aaKnown RBP3.03□□□□□ -1.92
SMC4-208ENST00000467468 TSG101Q99816 390 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 NICN1Q9BSH3 213 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 RGCCQ9H4X1 137 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 TUBG2Q9NRH3 451 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 ZNF275Q9NSD4 429 aaPredicted RBP3.03□□□□□ -1.92
SMC4-208ENST00000467468 AIG1Q9NVV5 245 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 VNN3Q9NY84 501 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 MTCH1Q9NZJ7 389 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 TMEM9Q9P0T7 183 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 ABCD2Q9UBJ2 740 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 UXTQ9UBK9 157 aaPredicted RBP3.03□□□□□ -1.92
SMC4-208ENST00000467468 CNTNAP1P78357 1384 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 TNIKQ9UKE5 1360 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 ADAMTS9Q9P2N4 1935 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 IGLV3-10A0A075B6K4 115 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 KIR2DL5BA0A0G2JN68 375 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 KIR2DL5BA0A0G2JPC4 375 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 GABRR3A8MPY1 467 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 ERVV-1B6SEH8 477 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 EIF3GO75821 320 aaKnown RBP eCLIP3.02□□□□□ -1.938e-13■■■■■ 59.2
SMC4-208ENST00000467468 FGFR1OPO95684 399 aaKnown RBP3.02□□□□□ -1.93
SMC4-208ENST00000467468 TIMP1P01033 207 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 HSPB1P04792 205 aaKnown RBP3.02□□□□□ -1.93
SMC4-208ENST00000467468 CRYGCP07315 174 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 SRMP19623 302 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 PSMB1P20618 241 aaKnown RBP3.02□□□□□ -1.93
SMC4-208ENST00000467468 MSR1P21757 451 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 AQP2P41181 271 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 VDAC2P45880 294 aaPredicted RBP3.02□□□□□ -1.93
SMC4-208ENST00000467468 SH3BGRP55822 239 aaPredicted RBP3.02□□□□□ -1.93
SMC4-208ENST00000467468 CLDN18P56856 261 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 CARD18P57730 90 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 ADARB1P78563 741 aaKnown RBP3.02□□□□□ -1.93
SMC4-208ENST00000467468 DNAJC3Q13217 504 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 GPNMBQ14956 572 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 PGGHGQ32M88 737 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 SOHLH1Q5JUK2 328 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 CASC10Q5T4H9 136 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 GPR157Q5UAW9 335 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 ZNF620Q6ZNG0 422 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 FBXO16Q8IX29 292 aaPredicted RBP3.02□□□□□ -1.93
SMC4-208ENST00000467468 KIR2DL5AQ8N109 375 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 C8orf31Q8N9H6 132 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 VN1R2Q8NFZ6 395 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 OR9G1Q8NH87 305 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 KIR2DL5BQ8NHK3 375 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 CXorf40AQ8TE69 158 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 CAPSLQ8WWF8 208 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 FRAT1Q92837 279 aaPredicted RBP3.02□□□□□ -1.93
SMC4-208ENST00000467468 RARRES2Q99969 163 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 IL22Q9GZX6 179 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 C8orf33Q9H7E9 229 aaPredicted RBP3.02□□□□□ -1.93
SMC4-208ENST00000467468 NTN4Q9HB63 628 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 PLGRKTQ9HBL7 147 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 CHRAC1Q9NRG0 131 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 XCL2Q9UBD3 114 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 ZNF107Q9UII5 783 aaPredicted RBP3.02□□□□□ -1.93
SMC4-208ENST00000467468 SLC17A4Q9Y2C5 497 aa3.02□□□□□ -1.93
SMC4-208ENST00000467468 C12orf71A8MTZ7 269 aa3.01□□□□□ -1.93
SMC4-208ENST00000467468 ZNF701M0R085 212 aaPredicted RBP3.01□□□□□ -1.93
SMC4-208ENST00000467468 SPOPO43791 374 aa3.01□□□□□ -1.93
SMC4-208ENST00000467468 EIF4E2O60573 245 aaKnown RBP3.01□□□□□ -1.93
SMC4-208ENST00000467468 CLIC3O95833 236 aa3.01□□□□□ -1.93
SMC4-208ENST00000467468 IGKV3-15P01624 115 aa3.01□□□□□ -1.93
SMC4-208ENST00000467468 SERPINE2P07093 398 aa3.01□□□□□ -1.93
SMC4-208ENST00000467468 AZU1P20160 251 aa3.01□□□□□ -1.93
SMC4-208ENST00000467468 SUB1P53999 127 aaKnown RBP eCLIP3.01□□□□□ -1.93
SMC4-208ENST00000467468 TAS2R19P59542 299 aa3.01□□□□□ -1.93
SMC4-208ENST00000467468 ZNF92Q03936 586 aa3.01□□□□□ -1.93
SMC4-208ENST00000467468 SF3A2Q15428 464 aaKnown RBP3.01□□□□□ -1.93
SMC4-208ENST00000467468 STUMQ69YW2 141 aa3.01□□□□□ -1.93
SMC4-208ENST00000467468 OR52W1Q6IF63 320 aa3.01□□□□□ -1.93
SMC4-208ENST00000467468 ANKRD26P1Q6NSI1 321 aa3.01□□□□□ -1.93
SMC4-208ENST00000467468 TTC23LQ6PF05 361 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms