RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 MAGEE2Q8TD90 523 aaPredicted RBP14.12□□□□□ -0.15
GPC1-207ENST00000466624 TMEM54Q969K7 222 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 ZNF570Q96NI8 536 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 KCNK17Q96T54 332 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 CIB1Q99828 191 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 ALG12Q9BV10 488 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 IFT27Q9BW83 186 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 OR10A4Q9H209 315 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 B3GAT2Q9NPZ5 323 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 KRT84Q9NSB2 600 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 ASB6Q9NWX5 421 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 GALNT8Q9NY28 637 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 UPB1Q9UBR1 384 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 IL20RAQ9UHF4 553 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 ADAM18Q9Y3Q7 739 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 IER3IP1Q9Y5U9 82 aa14.12□□□□□ -0.15
GPC1-207ENST00000466624 UPK3AO75631 287 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 TRMUO75648 421 aaKnown RBP14.11□□□□□ -0.15
GPC1-207ENST00000466624 SOX14O95416 240 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 PPP1R3DO95685 299 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 ALPLP05186 524 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 PSMB1P20618 241 aaKnown RBP14.11□□□□□ -0.15
GPC1-207ENST00000466624 IGFBP5P24593 272 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 PEX19P40855 299 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 ALDH3A2P51648 485 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 ZNF133P52736 654 aaPredicted RBP14.11□□□□□ -0.15
GPC1-207ENST00000466624 ESRRGP62508 458 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 SORDQ00796 357 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 ITGADQ13349 1161 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 TOP3AQ13472 1001 aaPredicted RBP14.11□□□□□ -0.15
GPC1-207ENST00000466624 DAG1Q14118 895 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 ANKRD34AQ69YU3 496 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 WDFY1Q8IWB7 410 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 GPR137CQ8N3F9 429 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 LNX2Q8N448 690 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 OR2T33Q8NG76 320 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 OR6N1Q8NGY5 312 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 Q96M85 177 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 ERMAPQ96PL5 475 aaPredicted RBP14.11□□□□□ -0.15
GPC1-207ENST00000466624 SNX18Q96RF0 628 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 TSSK6Q9BXA6 273 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 HDHD5Q9BXW7 423 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 SMURF2Q9HAU4 748 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 TAS2R16Q9NYV7 291 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 GLTPQ9NZD2 209 aa14.11□□□□□ -0.15
GPC1-207ENST00000466624 TMEFF2Q9UIK5 374 aaPredicted RBP14.11□□□□□ -0.15
GPC1-207ENST00000466624 TEX13CA0A0J9YWL9 993 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 ZNF587BE7ETH6 402 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 H3BN98 237 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 XKRYO14609 159 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 EI24O14681 340 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 CASQ2O14958 399 aaPredicted RBP14.1□□□□□ -0.15
GPC1-207ENST00000466624 MGRN1O60291 552 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 KRT33AO76009 404 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 IGHV3-9P01782 118 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 MPGP29372 298 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 CLRN1P58418 232 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 RUNX1T1Q06455 604 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 FAPQ12884 760 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 RIPK1Q13546 671 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 KRR1Q13601 381 aaKnown RBP14.1□□□□□ -0.15
GPC1-207ENST00000466624 MESTQ5EB52 335 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 CLEC12AQ5QGZ9 265 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 SFRP5Q5T4F7 317 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 CARD17Q5XLA6 110 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 STAC2Q6ZMT1 411 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 CBR4Q8N4T8 237 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 HDAC2Q92769 488 aaKnown RBP14.1□□□□□ -0.15
GPC1-207ENST00000466624 EME1Q96AY2 570 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 NMD3Q96D46 503 aaKnown RBP14.1□□□□□ -0.15
GPC1-207ENST00000466624 BOD1Q96IK1 185 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 ALKBH3Q96Q83 286 aaPredicted RBP14.1□□□□□ -0.15
GPC1-207ENST00000466624 USB1Q9BQ65 265 aaKnown RBP14.1□□□□□ -0.15
GPC1-207ENST00000466624 RNPEPL1Q9HAU8 725 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 SLC25A19Q9HC21 320 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 C8orf4Q9NR00 106 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 GPR52Q9Y2T5 361 aa14.1□□□□□ -0.15
GPC1-207ENST00000466624 IGFBP1P08833 259 aaPredicted RBP14.09□□□□□ -0.15
GPC1-207ENST00000466624 IGHV1-2P23083 117 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 NOS3P29474 1203 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 GRK5P34947 590 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 GIPRP48546 466 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 CRISP1P54107 249 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 SH3BGRP55822 239 aaPredicted RBP14.09□□□□□ -0.15
GPC1-207ENST00000466624 CDK5Q00535 292 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 ROR2Q01974 943 aaKnown RBP14.09□□□□□ -0.15
GPC1-207ENST00000466624 PGGHGQ32M88 737 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 PHYHD1Q5SRE7 291 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 THEM4Q5T1C6 240 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 SLC27A4Q6P1M0 643 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 ZBTB49Q6ZSB9 765 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 LINGO2Q7L985 606 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 CXorf67Q86X51 503 aaPredicted RBP14.09□□□□□ -0.15
GPC1-207ENST00000466624 ZNF433Q8N7K0 673 aaPredicted RBP14.09□□□□□ -0.15
GPC1-207ENST00000466624 C1orf162Q8NEQ5 155 aaPredicted RBP14.09□□□□□ -0.15
GPC1-207ENST00000466624 RASD2Q96D21 266 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 RBP7Q96R05 134 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 GABARAPL3Q9BY60 117 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 ULBP2Q9BZM5 246 aa14.09□□□□□ -0.15
GPC1-207ENST00000466624 GPR35Q9HC97 309 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms