RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 KISS1RQ969F8 398 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-205ENST00000465238 S100PBPQ96BU1 408 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 TXNDC15Q96J42 360 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 FUZQ9BT04 418 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 REEP1Q9H902 201 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 NGBQ9NPG2 151 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 INIPQ9NRY2 104 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 ZNF701Q9NV72 531 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-205ENST00000465238 MED29Q9NX70 200 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 MALT1Q9UDY8 824 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 A0A1W2PRG6 482 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 SLC35F4A4IF30 521 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 GNGT2O14610 69 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 SMAD7O15105 426 aaKnown RBP15.56■□□□□ 0.08
COL7A1-205ENST00000465238 CST1P01037 141 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 F13BP05160 661 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 IFNGR1P15260 489 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 HMGA2P52926 109 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 TAF11Q15544 211 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 NHLRC1Q6VVB1 395 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 BHLHA15Q7RTS1 189 aaPredicted RBP15.56■□□□□ 0.08
COL7A1-205ENST00000465238 LINC00471Q8N535 108 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 OR13C2Q8NGS9 318 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 MOSPD2Q8NHP6 518 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 ADAD1Q96M93 576 aaKnown RBP15.56■□□□□ 0.08
COL7A1-205ENST00000465238 OR2M2Q96R28 347 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 TNFRSF13CQ96RJ3 184 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 USB1Q9BQ65 265 aaKnown RBP15.56■□□□□ 0.08
COL7A1-205ENST00000465238 EMC6Q9BV81 110 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 NDEL1Q9GZM8 345 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 HIF3AQ9Y2N7 669 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 LYVE1Q9Y5Y7 322 aa15.56■□□□□ 0.08
COL7A1-205ENST00000465238 TRAV27A0A087WT01 109 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 CIB4A0PJX0 185 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 CLOCKO15516 846 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 FKBP6O75344 327 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 LYZL6O75951 148 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 ZNF432O94892 652 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 BCL10O95999 233 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 TSPAN19P0C672 248 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 IGHV1-2P23083 117 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 OMPP47874 163 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 BIDP55957 195 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 PRPS1P60891 318 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 TSC22D1Q15714 1073 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 ZBED5Q49AG3 693 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 ALG10Q5BKT4 473 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 CARD17Q5XLA6 110 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 ADAM5Q6NVV9 412 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 GPR137CQ8N3F9 429 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 HSD17B8Q92506 261 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 AKAP1Q92667 903 aaKnown RBP eCLIP15.55■□□□□ 0.08
COL7A1-205ENST00000465238 LINC00470Q9BZP3 86 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 ESRP2Q9H6T0 727 aaKnown RBP15.55■□□□□ 0.08
COL7A1-205ENST00000465238 TAS2R16Q9NYV7 291 aa15.55■□□□□ 0.08
COL7A1-205ENST00000465238 SAMHD1Q9Y3Z3 626 aaKnown RBP15.55■□□□□ 0.08
COL7A1-205ENST00000465238 UNC119BA6NIH7 251 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 MCIDASD6RGH6 385 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 ZNF587BE7ETH6 402 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 CDC42EP2O14613 210 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 UPK3AO75631 287 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 CCNB2O95067 398 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 COX5AP20674 150 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 LIMS1P48059 325 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 DAP3P51398 398 aaKnown RBP15.54■□□□□ 0.08
COL7A1-205ENST00000465238 RPS4XP62701 263 aaKnown RBP15.54■□□□□ 0.08
COL7A1-205ENST00000465238 TGFBR3Q03167 851 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 LGALS3BPQ08380 585 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 CAMK2DQ13557 499 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 ALKBH2Q6NS38 261 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 HMBOX1Q6NT76 420 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 ZER1Q7Z7L7 766 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 TMEM123Q8N131 208 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 ZNF433Q8N7K0 673 aaPredicted RBP15.54■□□□□ 0.08
COL7A1-205ENST00000465238 PAPD5Q8NDF8 572 aaKnown RBP15.54■□□□□ 0.08
COL7A1-205ENST00000465238 OR4C15Q8NGM1 316 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 OR6N1Q8NGY5 312 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 OR6X1Q8NH79 312 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 GNPDA2Q8TDQ7 276 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 UTP4Q969X6 686 aaKnown RBP15.54■□□□□ 0.08
COL7A1-205ENST00000465238 B3GAT2Q9NPZ5 323 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 RNF115Q9Y4L5 304 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 U3KQV3 271 aa15.54■□□□□ 0.08
COL7A1-205ENST00000465238 CADP27708 2225 aa15.53■□□□□ 0.08
COL7A1-205ENST00000465238 MPGP29372 298 aa15.53■□□□□ 0.08
COL7A1-205ENST00000465238 RPL4P36578 427 aaKnown RBP15.53■□□□□ 0.08
COL7A1-205ENST00000465238 ATP5J2P56134 94 aa15.53■□□□□ 0.08
COL7A1-205ENST00000465238 CTXN1P60606 82 aa15.53■□□□□ 0.08
COL7A1-205ENST00000465238 GABPB1Q06547 395 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-205ENST00000465238 PPP1R8Q12972 351 aaKnown RBP15.53■□□□□ 0.08
COL7A1-205ENST00000465238 GK3PQ14409 553 aa15.53■□□□□ 0.08
COL7A1-205ENST00000465238 MELKQ14680 651 aa15.53■□□□□ 0.08
COL7A1-205ENST00000465238 TAB1Q15750 504 aa15.53■□□□□ 0.08
COL7A1-205ENST00000465238 NCMAPQ5T1S8 102 aa15.53■□□□□ 0.08
COL7A1-205ENST00000465238 C9orf135Q5VTT2 229 aa15.53■□□□□ 0.08
COL7A1-205ENST00000465238 HDDC2Q7Z4H3 204 aa15.53■□□□□ 0.08
COL7A1-205ENST00000465238 C20orf196Q8IYI0 205 aa15.53■□□□□ 0.08
COL7A1-205ENST00000465238 LRR1Q96L50 414 aa15.53■□□□□ 0.08
COL7A1-205ENST00000465238 RAB3IPQ96QF0 476 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-205ENST00000465238 STX18Q9P2W9 335 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms