RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 TMEM183BQ1AE95 376 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 RFX4Q33E94 735 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 TSPO2Q5TGU0 170 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 AGBL2Q5U5Z8 902 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 LCN12Q6JVE5 192 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 DUX4L9Q6RFH8 374 aaPredicted RBP1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 ZYG11AQ6WRX3 759 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 LRRC74BQ6ZQY2 392 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 LINC00173Q6ZV60 143 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 H2AFVQ71UI9 128 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 PEX26Q7Z412 305 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 SLC22A9Q8IVM8 553 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 C12orf56Q8IXR9 622 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 TMEM183AQ8IXX5 376 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 ENTHD1Q8IYW4 607 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 SAXO1Q8IYX7 474 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 PUSL1Q8N0Z8 303 aaKnown RBP1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 UBE2J2Q8N2K1 259 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 STPG2Q8N412 459 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 Q8N976 141 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 ACOT4Q8N9L9 421 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 Q8N9W7 124 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 DUSP18Q8NEJ0 188 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 OR51G1Q8NGK1 321 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF596Q8TC21 504 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 MARCH1Q8TCQ1 289 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 DTX3LQ8TDB6 740 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 ACTRT1Q8TDG2 376 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 CD300LFQ8TDQ1 290 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 TMEM158Q8WZ71 300 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 IFT74Q96LB3 600 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 LINC00167Q96N53 147 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 WFIKKN1Q96NZ8 548 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 RARRES2Q99969 163 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 TCHPQ9BT92 498 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 GPR61Q9BZJ8 451 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 PKIBQ9C010 78 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 NEUROG2Q9H2A3 272 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 LINC00597Q9H2U6 94 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 CWH43Q9H720 699 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 MRPL47Q9HD33 250 aaKnown RBP1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 MYOZ2Q9NPC6 264 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 CTPS2Q9NRF8 586 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 PISDQ9UG56 409 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 IKZF2Q9UKS7 526 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 NACAE9PAV3 2078 aa1.17□□□□□ -2.22
NUCKS1-202ENST00000464938 MAP3K15Q6ZN16 1313 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 IGLV11-55A0A075B6I3 123 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 UBXN8O00124 270 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 DLGAP1O14490 977 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 ICOSLGO75144 302 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 SUPT3HO75486 399 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 ALDOBP05062 364 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 GIPP09681 153 aaPredicted RBP1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 CSF3P09919 207 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 PNMA6AP0CW24 399 aaPredicted RBP1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF30P17039 623 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 NCF2P19878 526 aaPredicted RBP1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 PBLDP30039 288 aaPredicted RBP1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 RORAP35398 523 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 CXCL5P42830 114 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 RFX3P48380 749 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 CCR6P51684 374 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 MRPS22P82650 360 aaKnown RBP1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 HMGCS1Q01581 520 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 LRRC74AQ0VAA2 488 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 MADCAM1Q13477 382 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 SSX2Q16385 188 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 KCTD19Q17RG1 926 aaPredicted RBP1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 COA6Q5JTJ3 125 aaKnown RBP1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 CNIH2Q6PI25 160 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 SASS6Q6UVJ0 657 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 CERS6Q6ZMG9 384 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 NBPF5PQ86XG9 351 aaPredicted RBP1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 PCP2Q8IVA1 136 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 MS4A15Q8N5U1 240 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 NECAB1Q8N987 351 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 HSD17B11Q8NBQ5 300 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 FBXL13Q8NEE6 735 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 OR7G2Q8NG99 324 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 OR1S2Q8NGQ3 325 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 RAB3IL1Q8TBN0 382 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 FANK1Q8TC84 345 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 LKAAEAR1Q8TD35 194 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 GPR151Q8TDV0 419 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 RNF139Q8WU17 664 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 PIBF1Q8WXW3 757 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 SGK3Q96BR1 496 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 TPD52L3Q96J77 140 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 TSSK3Q96PN8 268 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 ECSITQ9BQ95 431 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 SLC17A9Q9BYT1 436 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 CDC42EP4Q9H3Q1 356 aaKnown RBP1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 TPK1Q9H3S4 243 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 CLMPQ9H6B4 373 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 TM9SF3Q9HD45 589 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 LHX9Q9NQ69 397 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 INPP5EQ9NRR6 644 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 GNPTGQ9UJJ9 305 aa1.16□□□□□ -2.22
NUCKS1-202ENST00000464938 KLK12Q9UKR0 248 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms