RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 DHRS7BQ6IAN0 325 aaPredicted RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 C11orf87Q6NUJ2 197 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 ACOT7LQ6ZUV0 252 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 CDC20BQ86Y33 519 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 MCHR2Q969V1 340 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 CTHRC1Q96CG8 243 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 RASD2Q96D21 266 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 VWCEQ96DN2 955 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 NARS2Q96I59 477 aaKnown RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 CCNL2Q96S94 520 aaPredicted RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 TSNAXQ99598 290 aaKnown RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 VRK1Q99986 396 aaPredicted RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 EDEM2Q9BV94 578 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 COMMD4Q9H0A8 199 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 LMAN2LQ9H0V9 348 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 WDR13Q9H1Z4 485 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 SLCO5A1Q9H2Y9 848 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 BIN3Q9NQY0 253 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 KLHDC2Q9Y2U9 406 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 CARHSP1Q9Y2V2 147 aaKnown RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 PLEKHM1Q9Y4G2 1056 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 OR1A2Q9Y585 309 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 TRAV18A0A075B6X5 111 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 A0A087WV48 116 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 TBC1D3IA0A087WXS9 549 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 LOC100289279A0A1B0GTE1 492 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 TMEM72A0PK05 275 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 RNF222A6NCQ9 220 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 EFCAB7A8K855 629 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 PSMD9O00233 223 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 SLC17A2O00624 439 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 IMPA2O14732 288 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 SIGLEC5O15389 551 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 FGF16O43320 207 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 LATO43561 262 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 FGF17O60258 216 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 RDH16O75452 317 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 RPP14O95059 124 aaKnown RBP6.63□□□□□ -1.35
USP48-206ENST00000464577 RAB3DO95716 219 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 GPR75O95800 540 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 MAS1P04201 325 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 IFNA4P05014 189 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 CEACAM5P06731 702 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 CD34P28906 385 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 GRPRP30550 384 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 RFC3P40938 356 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 POU3F4P49335 361 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 RAB13P51153 203 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 EFNB2P52799 333 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 DEFB103AP81534 67 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 DCDP81605 110 aaKnown RBP6.63□□□□□ -1.35
USP48-206ENST00000464577 ID2Q02363 134 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 EGR3Q06889 387 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 SIGLEC14Q08ET2 396 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 DMWDQ09019 674 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 RASGEF1BQ0VAM2 473 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 EXOSC7Q15024 291 aaKnown RBP6.63□□□□□ -1.35
USP48-206ENST00000464577 ZNF141Q15928 474 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 DEFB134Q4QY38 66 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 LIN54Q6MZP7 749 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 LEG1Q6P5S2 330 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 HAGHLQ6PII5 290 aaPredicted RBP6.63□□□□□ -1.35
USP48-206ENST00000464577 TMEM205Q6UW68 189 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 TMEM92Q6UXU6 159 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 SLC39A5Q6ZMH5 540 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 ABHD13Q7L211 337 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 JAZF1Q86VZ6 243 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 LDLRAD3Q86YD5 345 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 LURAP1LQ8IV03 231 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 PUSL1Q8N0Z8 303 aaKnown RBP6.63□□□□□ -1.35
USP48-206ENST00000464577 OR2G2Q8NGZ5 317 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 ZCCHC10Q8TBK6 192 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 SUSD6Q92537 303 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 ARSGQ96EG1 525 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 ADAD1Q96M93 576 aaKnown RBP6.63□□□□□ -1.35
USP48-206ENST00000464577 OR2A5Q96R48 311 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 C12orf57Q99622 126 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 UQCC2Q9BRT2 126 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 LMF2Q9BU23 707 aaKnown RBP6.63□□□□□ -1.35
USP48-206ENST00000464577 WSB2Q9NYS7 404 aaPredicted RBP6.63□□□□□ -1.35
USP48-206ENST00000464577 COMMD9Q9P000 198 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 DEC1Q9P2X7 70 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 CPNE7Q9UBL6 633 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 ZMAT5Q9UDW3 170 aaKnown RBP6.63□□□□□ -1.35
USP48-206ENST00000464577 SLC17A4Q9Y2C5 497 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 COLEC10Q9Y6Z7 277 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 SPACA6W5XKT8 324 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 MYO10Q9HD67 2058 aa6.63□□□□□ -1.35
USP48-206ENST00000464577 F8W036 122 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 GPR31O00270 319 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 PHYHO14832 338 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 P2RX6O15547 441 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 TNFSF14O43557 240 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 TXNDC12O95881 172 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 APOC1P02654 83 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 CD74P04233 296 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 PVALBP20472 110 aaPredicted RBP6.62□□□□□ -1.35
USP48-206ENST00000464577 BDKRB2P30411 391 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 DRD3P35462 400 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 DLSTP36957 453 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms