RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 PARS2Q7L3T8 475 aaKnown RBP6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 OR2W3Q7Z3T1 314 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 JAZF1Q86VZ6 243 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 MEX3DQ86XN8 651 aaKnown RBP6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 ZNF595Q8IYB9 648 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 MUC20Q8N307 709 aaPredicted RBP6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 C15orf54Q8N8G6 183 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 ZDHHC22Q8N966 263 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 STEAP2Q8NFT2 490 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 OR4D9Q8NGE8 314 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 OR4C16Q8NGL9 310 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 OR5M1Q8NGP8 315 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 OR6S1Q8NH40 331 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 NT5CQ8TCD5 201 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 STK35Q8TDR2 534 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 ASB17Q8WXJ9 295 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 PTX4Q96A99 478 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 COX14Q96I36 57 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 ZNF681Q96N22 645 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 IL17FQ96PD4 163 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 PHB2Q99623 299 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 VRK1Q99986 396 aaPredicted RBP6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 TRMT61BQ9BVS5 477 aaKnown RBP6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 RSPO3Q9BXY4 272 aaPredicted RBP6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 SEMA6CQ9H3T2 930 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 MED20Q9H944 212 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 LYRM4Q9HD34 91 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 SMCO4Q9NRQ5 59 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 COA4Q9NYJ1 87 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 MRPL15Q9P015 296 aaKnown RBP6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 CTSFQ9UBX1 484 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 KLK11Q9UBX7 282 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 CHRNA9Q9UGM1 479 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 CLEC4EQ9ULY5 219 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 C19orf53Q9UNZ5 99 aaPredicted RBP6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 ZNF337Q9Y3M9 751 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 ATG4BQ9Y4P1 393 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 PCDHGA5Q9Y5G8 931 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 WIF1Q9Y5W5 379 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 COLEC10Q9Y6Z7 277 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 PDE4DIPQ5VU43 2346 aa6.56□□□□□ -1.36
CLSTN1-204ENST00000464286 MDC1Q14676 2089 aaKnown RBP6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 A0A0B4J2E0 115 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 A0A1B0GTI1 187 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 A0A1B0GX12 115 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 TCRBV16S1A1N1A0A5B0 115 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 FEZF1A0PJY2 475 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 BLACEA4D250 179 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 TVP23AA6NH52 213 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 EFCAB7A8K855 629 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 DVL2O14641 736 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 TAAR5O14804 337 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 NUPL2O15504 423 aaKnown RBP6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 FGF16O43320 207 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 EIF4E2O60573 245 aaKnown RBP6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 RNGTTO60942 597 aaKnown RBP6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 ZNF254O75437 659 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 SIX6O95475 246 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 CTSLP07711 333 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 OR4E1P0C645 316 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 VSIG10L2P0DP72 767 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 PNMTP11086 282 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 SYN1P17600 705 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 RAB6AP20340 208 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 MAOAP21397 527 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 AK4P27144 223 aaPredicted RBP6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 TACR3P29371 465 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 DCTDP32321 178 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 CX3CR1P49238 355 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 CCL23P55773 120 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 H2BFSP57053 126 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 DCDP81605 110 aaKnown RBP6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 AIMP2Q13155 320 aaKnown RBP6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 ELAVL3Q14576 367 aaKnown RBP6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 PEA15Q15121 130 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 ACTBL2Q562R1 376 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 PHF19Q5T6S3 580 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 FCRL6Q6DN72 434 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 JMJD6Q6NYC1 403 aaPredicted RBP6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 FAM180BQ6P0A1 224 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 NHLRC1Q6VVB1 395 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 RPTNQ6XPR3 784 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 ZNF813Q6ZN06 617 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 ZNF793Q6ZN11 406 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 ESPNLQ6ZVH7 1005 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 NUP54Q7Z3B4 507 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 PARGQ86W56 976 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 TMPRSS12Q86WS5 348 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 TMEM25Q86YD3 366 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 ZNF547Q8IVP9 402 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 SLC39A11Q8N1S5 342 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 COMMD1Q8N668 190 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 ZNF676Q8N7Q3 588 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 LINC00469Q8N7U9 141 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 DMBX1Q8NFW5 382 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 OR51A7Q8NH64 312 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 GLYATL2Q8WU03 294 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 ZBTB8AQ96BR9 441 aa6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 FOXRED1Q96CU9 486 aaPredicted RBP6.55□□□□□ -1.36
CLSTN1-204ENST00000464286 ZMYND19Q96E35 227 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms