RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ANKS4BQ8N8V4 417 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 ZNF540Q8NDQ6 660 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 LIPHQ8WWY8 451 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 SLC25A44Q96H78 314 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 ZNF583Q96ND8 569 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 VRK1Q99986 396 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 ECSITQ9BQ95 431 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 MEPEQ9NQ76 525 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 CDC42EP3Q9UKI2 254 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 CENPBD1B2RD01 187 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 C11orf98E9PRG8 122 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 UBL3O95164 117 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 OR5F1O95221 314 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 IFNA2P01563 188 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 IGFBP1P08833 259 aaPredicted RBP17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 B4GALT1P15291 398 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 GIFP27352 417 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 ARFIP2P53365 341 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 SNTB2Q13425 540 aaKnown RBP17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 HIST3H3Q16695 136 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 NRN1LQ496H8 165 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 REP15Q6BDI9 236 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 CGB2Q6NT52 195 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 LRFN4Q6PJG9 635 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 CXXC5Q7LFL8 322 aaKnown RBP17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 CARM1Q86X55 608 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 LRRC17Q8N6Y2 441 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 SPATA3Q8NHX4 192 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 ZNF566Q969W8 418 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 MS4A3Q96HJ5 214 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 SEPHS2Q99611 448 aa17.74■□□□□ 0.43
PDLIM4-205ENST00000463615 FBN1P35555 2871 aaKnown RBP17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 MRASO14807 208 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 SLC22A2O15244 555 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 RNF13O43567 381 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 IFNA14P01570 189 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 MT-ND1P03886 318 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 TSPAN19P0C672 248 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 FAM157CP0CG43 387 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 PGA4P0DJD7 388 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 PGA3P0DJD8 388 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 THRBP10828 461 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 CD79AP11912 226 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 GLRXP35754 106 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 RAB1AP62820 205 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 SPATA21Q7Z572 469 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 DPPA2Q7Z7J5 298 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 SVOPLQ8N434 492 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 FOXN4Q96NZ1 517 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 FGFR1OP2Q9NVK5 253 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 LPAR3Q9UBY5 353 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 CMAHPQ9Y471 501 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 SPEF1Q9Y4P9 236 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 RTTNQ86VV8 2226 aa17.73■□□□□ 0.43
PDLIM4-205ENST00000463615 MXRA5Q9NR99 2828 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 MGRN1O60291 552 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 SERPINI2O75830 405 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 STAMBPO95630 424 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 RAB36O95755 333 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 HIST1H2ABP04908 130 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 ERCC1P07992 297 aaPredicted RBP17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 GIPRP48546 466 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 ZNF133P52736 654 aaPredicted RBP17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 FXNQ16595 210 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 MMEL1Q495T6 779 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 HIST3H2AQ7L7L0 130 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 NANOGNBQ7Z5D8 188 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 SKA3Q8IX90 412 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 SLC22A24Q8N4F4 322 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 PCYOX1LQ8NBM8 494 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 C10orf82Q8WW14 230 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 HIST1H2ACQ93077 130 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 MRPL24Q96A35 216 aaKnown RBP17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 MRPL13Q9BYD1 178 aaKnown RBP17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 CCDC134Q9H6E4 229 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 TMEM38BQ9NVV0 291 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 SH3GLB1Q9Y371 365 aa17.72■□□□□ 0.43
PDLIM4-205ENST00000463615 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.71■□□□□ 0.431e-5■■■■□ 21.5
PDLIM4-205ENST00000463615 IGHV4-61A0A0C4DH41 118 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 HTR3EA5X5Y0 456 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 NPIPB13A6NJU9 1138 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 NPIPB4C9JG80 1138 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 KPNA4O00629 521 aaPredicted RBP17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 DHHO43323 396 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 BCL10O95999 233 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 SERPINA5P05154 406 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 OR8G3PP0DMU2 310 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 ZNF23P17027 643 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 PTDSS1P48651 473 aaKnown RBP17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 RPS23P62266 143 aaKnown RBP17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 PIGFQ07326 219 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 MSMPQ1L6U9 139 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 KRT80Q6KB66 452 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 ZNF584Q8IVC4 421 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 NKAIN4Q8IVV8 208 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 ZNF786Q8N393 782 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 KCNK17Q96T54 332 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 GID8Q9NWU2 228 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 RIMS3Q9UJD0 308 aa17.71■□□□□ 0.43
PDLIM4-205ENST00000463615 MALRD1Q5VYJ5 2156 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms