RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 AIM2O14862 343 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 CASQ2O14958 399 aaPredicted RBP2.09□□□□□ -2.07
HDAC6-212ENST00000461608 MRPS12O15235 138 aaKnown RBP2.09□□□□□ -2.07
HDAC6-212ENST00000461608 CDH16O75309 829 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 INSP01308 110 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 PABPC4LP0CB38 370 aaKnown RBP2.09□□□□□ -2.07
HDAC6-212ENST00000461608 NR2C1P13056 603 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 HNRNPH3P31942 346 aaKnown RBP2.09□□□□□ -2.07
HDAC6-212ENST00000461608 NSG1P42857 185 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 SLC1A1P43005 524 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 RAB9AP51151 201 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 CCR8P51685 355 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 CCNHP51946 323 aaPredicted RBP2.09□□□□□ -2.07
HDAC6-212ENST00000461608 GPX6P59796 221 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 ENPEPQ07075 957 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 TGM3Q08188 693 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 SMARCB1Q12824 385 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 IL18Q14116 193 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 PRPSAP1Q14558 356 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 MPPED2Q15777 294 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 PGGHGQ32M88 737 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 RFX4Q33E94 735 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 C1orf94Q6P1W5 598 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 SSX9Q7RTT3 188 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 SCD5Q86SK9 330 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 LHFPL3Q86UP9 236 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 TMEM61Q8N0U2 210 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 GTPBP8Q8N3Z3 284 aaPredicted RBP2.09□□□□□ -2.07
HDAC6-212ENST00000461608 ZADH2Q8N4Q0 377 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 MS4A15Q8N5U1 240 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 EID2Q8N6I1 236 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 DCAF4L2Q8NA75 395 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 CCDC54Q8NEL0 328 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 NPBQ8NG41 125 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 OR4F15Q8NGB8 312 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 FAM81AQ8TBF8 368 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 SDR42E1Q8WUS8 393 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 NDRG1Q92597 394 aaKnown RBP2.09□□□□□ -2.07
HDAC6-212ENST00000461608 OR2M2Q96R28 347 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 PARP12Q9H0J9 701 aaKnown RBP2.09□□□□□ -2.07
HDAC6-212ENST00000461608 LINC00597Q9H2U6 94 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 TMEM185BQ9H7F4 350 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 CTPS2Q9NRF8 586 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 INPP5EQ9NRR6 644 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 GPATCH2LQ9NWQ4 482 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 LYARQ9NX58 379 aaKnown RBP2.09□□□□□ -2.07
HDAC6-212ENST00000461608 TMED5Q9Y3A6 229 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 PDS5BQ9NTI5 1447 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 A0A1B0GUA9 196 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 USP27XA6NNY8 438 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 WRBO00258 174 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 CLOCKO15516 846 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 OR2J3O76001 311 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 GIPP09681 153 aaPredicted RBP2.08□□□□□ -2.08
HDAC6-212ENST00000461608 ZDHHC11BP0C7U3 371 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 DNAH10OSP0CZ25 163 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 IGHV3-43DP0DP04 118 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 CALM1P0DP23 149 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 CALM2P0DP24 149 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 CALM3P0DP25 149 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 ADRB3P13945 408 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 MGMTP16455 207 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF19P17023 458 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 NUDT1P36639 197 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 SERPINB5P36952 375 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 RFX3P48380 749 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 MRPL19P49406 292 aaKnown RBP2.08□□□□□ -2.08
HDAC6-212ENST00000461608 C21orf59P57076 290 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 NDPQ00604 133 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 MERTKQ12866 999 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 PDIA2Q13087 525 aaKnown RBP2.08□□□□□ -2.08
HDAC6-212ENST00000461608 SF3A2Q15428 464 aaKnown RBP2.08□□□□□ -2.08
HDAC6-212ENST00000461608 CHRNA6Q15825 494 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 SGCAQ16586 387 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 C2orf83Q53S99 150 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 PAGE3Q5JUK9 113 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 SASS6Q6UVJ0 657 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 TMEM179Q6ZVK1 233 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 SLC16A14Q7RTX9 510 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 RALGPS2Q86X27 583 aaPredicted RBP2.08□□□□□ -2.08
HDAC6-212ENST00000461608 IQCKQ8N0W5 287 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 PUSL1Q8N0Z8 303 aaKnown RBP2.08□□□□□ -2.08
HDAC6-212ENST00000461608 BBOF1Q8ND07 529 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 OR51G1Q8NGK1 321 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 OR4A4PQ8NGN8 299 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 OR10R2Q8NGX6 335 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 FAM110BQ8TC76 370 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 SLC22A8Q8TCC7 542 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 LKAAEAR1Q8TD35 194 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 MYDGFQ969H8 173 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 EXOSC8Q96B26 276 aaKnown RBP2.08□□□□□ -2.08
HDAC6-212ENST00000461608 SGK3Q96BR1 496 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 C20orf24Q9BUV8 137 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 AUNIPQ9H7T9 357 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 TMEM165Q9HC07 324 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 SAMSN1Q9NSI8 373 aaKnown RBP2.08□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF226Q9NYT6 803 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 NYAP2Q9P242 653 aa2.08□□□□□ -2.08
HDAC6-212ENST00000461608 UXTQ9UBK9 157 aaPredicted RBP2.08□□□□□ -2.08
HDAC6-212ENST00000461608 RPS6KB2Q9UBS0 482 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms