RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 NUP50Q9UKX7 468 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 SLC6A5Q9Y345 797 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 MED31Q9Y3C7 131 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 A0A1W2PNR3 127 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 SPDEFO95238 335 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 UQCRBP14927 111 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 MSX1P28360 303 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 POLR2HP52434 150 aaKnown RBP9.28□□□□□ -0.92
USP39-210ENST00000459775 FXYD6P3P58550 94 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 DCTN2Q13561 401 aaKnown RBP9.28□□□□□ -0.92
USP39-210ENST00000459775 TSTQ16762 297 aaKnown RBP9.28□□□□□ -0.92
USP39-210ENST00000459775 SLC36A3Q495N2 470 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 CLEC12AQ5QGZ9 265 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 C1orf94Q6P1W5 598 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 PLXDC2Q6UX71 529 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 TMEM251Q8N6I4 163 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 FAM83FQ8NEG4 500 aaPredicted RBP9.28□□□□□ -0.92
USP39-210ENST00000459775 PIGXQ8TBF5 258 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 POLR2J3Q9H1A7 115 aaKnown RBP9.28□□□□□ -0.92
USP39-210ENST00000459775 DEFB127Q9H1M4 99 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 UBQLN3Q9H347 655 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 PTGES2Q9H7Z7 377 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 USE1Q9NZ43 259 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 TP53TG5Q9Y2B4 290 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 ZNF337Q9Y3M9 751 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 MYO18BQ8IUG5 2567 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 BSNQ9UPA5 3926 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 OR2M5A3KFT3 312 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 SAGP10523 405 aaPredicted RBP9.27□□□□□ -0.93
USP39-210ENST00000459775 TNFSF4P23510 183 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 CCR9P51686 369 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 CASP6P55212 293 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 B3GALT5-AS1P59052 145 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 PLGLB1Q02325 96 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 PRKCDQ05655 676 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 FHL1Q13642 323 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 TEX30Q5JUR7 227 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 IGFN1Q86VF2 1251 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 RBMXL3Q8N7X1 1067 aaKnown RBP9.27□□□□□ -0.93
USP39-210ENST00000459775 OR8D4Q8NGM9 314 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 OR14L1PQ8NHC6 308 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 PHF21AQ96BD5 680 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 SCMH1Q96GD3 660 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 TNFRSF13CQ96RJ3 184 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 NEU1Q99519 415 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 UCK2Q9BZX2 261 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 RNF32Q9H0A6 362 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 SLC6A15Q9H2J7 730 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 AP4B1Q9Y6B7 739 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 TENM4Q6N022 2769 aa9.27□□□□□ -0.93
USP39-210ENST00000459775 TRAV20A0A0B4J274 112 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 H3BN98 237 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 APOC1P02654 83 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 TFPIP10646 304 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 PNMTP11086 282 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 CDKN1BP46527 198 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 GNG10P50151 68 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 MECP2P51608 486 aaKnown RBP9.26□□□□□ -0.93
USP39-210ENST00000459775 MLLT10P55197 1068 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 SUMO3P55854 103 aaPredicted RBP9.26□□□□□ -0.93
USP39-210ENST00000459775 DSCR4P56555 118 aaPredicted RBP9.26□□□□□ -0.93
USP39-210ENST00000459775 CLDN20P56880 219 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 PPIAP62937 165 aaKnown RBP9.26□□□□□ -0.93
USP39-210ENST00000459775 LINC00303Q3SY05 128 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 TMEM176BQ3YBM2 270 aaPredicted RBP9.26□□□□□ -0.93
USP39-210ENST00000459775 GLYR1Q49A26 553 aaPredicted RBP9.26□□□□□ -0.93
USP39-210ENST00000459775 THSD4Q6ZMP0 1018 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 SLC46A3Q7Z3Q1 461 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 CCDC71Q8IV32 467 aaPredicted RBP9.26□□□□□ -0.93
USP39-210ENST00000459775 KDM8Q8N371 416 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 TMEM234Q8WY98 164 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 ST8SIA1Q92185 356 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 MARVELD3Q96A59 401 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 CNBD2Q96M20 576 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 ADI1Q9BV57 179 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 PTDSS2Q9BVG9 487 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 ANKRD19PQ9H560 264 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 ZNF703Q9H7S9 590 aaPredicted RBP9.26□□□□□ -0.93
USP39-210ENST00000459775 FAM118AQ9NWS6 357 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 CHRNA9Q9UGM1 479 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 MGAT4BQ9UQ53 548 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 LIPGQ9Y5X9 500 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 A4D1N5 150 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 EFCAB9A8MZ26 197 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 DENRO43583 198 aaKnown RBP9.26□□□□□ -0.93
USP39-210ENST00000459775 SERPINI2O75830 405 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 ZNF81P51508 661 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 ADARB1P78563 741 aaKnown RBP9.26□□□□□ -0.93
USP39-210ENST00000459775 NFATC3Q12968 1075 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 C3AR1Q16581 482 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 CNPY1Q3B7I2 92 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 PLEKHN1Q494U1 663 aaPredicted RBP9.26□□□□□ -0.93
USP39-210ENST00000459775 NADK2Q4G0N4 442 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 YIF1BQ5BJH7 314 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 UBQLNLQ8IYU4 475 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 PACRGLQ8N7B6 248 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 GNPDA2Q8TDQ7 276 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 NR4A3Q92570 626 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 TFAP2CQ92754 450 aa9.26□□□□□ -0.93
USP39-210ENST00000459775 MRGPRX4Q96LA9 322 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms