RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 UPK3AO75631 287 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 UBL3O95164 117 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 KRT75O95678 551 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 SNAP29O95721 258 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 RAB36O95755 333 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 CELA3BP08861 270 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 NR2F1P10589 423 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 CCNA2P20248 432 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 ALDH3A1P30838 453 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 ACAA2P42765 397 aaKnown RBP4.84□□□□□ -1.63
VPS8-214ENST00000458721 CAPZA2P47755 286 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 CLDN17P56750 224 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 UBA52P62987 128 aaKnown RBP4.84□□□□□ -1.63
VPS8-214ENST00000458721 IL13RA1P78552 427 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 ARF1P84077 181 aaKnown RBP4.84□□□□□ -1.63
VPS8-214ENST00000458721 SLC3A1Q07837 685 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 SYPL1Q16563 259 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 MOGQ16653 247 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 CEACAM16Q2WEN9 425 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 NRN1LQ496H8 165 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 DCAF12L2Q5VW00 463 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 FAM91A1Q658Y4 838 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 FAHD2BQ6P2I3 314 aaPredicted RBP4.84□□□□□ -1.63
VPS8-214ENST00000458721 RBMS3Q6XE24 437 aaKnown RBP4.84□□□□□ -1.63
VPS8-214ENST00000458721 LINGO2Q7L985 606 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 RNF130Q86XS8 419 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 GSPT2Q8IYD1 628 aaKnown RBP4.84□□□□□ -1.63
VPS8-214ENST00000458721 C1orf174Q8IYL3 243 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 GLB1L3Q8NCI6 653 aaPredicted RBP4.84□□□□□ -1.63
VPS8-214ENST00000458721 RAB8BQ92930 207 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 POP5Q969H6 163 aaKnown RBP4.84□□□□□ -1.63
VPS8-214ENST00000458721 SLC38A4Q969I6 547 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 ZG16BQ96DA0 208 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 FAHD2AQ96GK7 314 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 TIMD4Q96H15 378 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 C16orf45Q96MC5 204 aaPredicted RBP4.84□□□□□ -1.63
VPS8-214ENST00000458721 ZNF75AQ96N20 296 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 OR2M2Q96R28 347 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 PANX1Q96RD7 426 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 GPA33Q99795 319 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 PTDSS2Q9BVG9 487 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 SLITRK2Q9H156 845 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 TPK1Q9H3S4 243 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 ZNF665Q9H7R5 613 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 EVA1AQ9H8M9 152 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 SEC61A2Q9H9S3 476 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 DDX28Q9NUL7 540 aaKnown RBP4.84□□□□□ -1.63
VPS8-214ENST00000458721 SLCO1C1Q9NYB5 712 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 B3GAT1Q9P2W7 334 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 GIMAP2Q9UG22 337 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 IFT52Q9Y366 437 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 GPR45Q9Y5Y3 372 aa4.84□□□□□ -1.63
VPS8-214ENST00000458721 TRRAPQ9Y4A5 3859 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 LOC105371242A0A075B767 164 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 A0A0G2JPF8 293 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 A0A1B0GUS0 222 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 A0A1W2PPW3 197 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 SH3PXD2BA1X283 911 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 C17orf100A8MU93 164 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 HNRNPCL2B2RXH8 293 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 HNRNPCL3B7ZW38 293 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 H3BSA7 217 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 PPIHO43447 177 aaKnown RBP4.83□□□□□ -1.64
VPS8-214ENST00000458721 TRAF3IP2O43734 574 aaPredicted RBP4.83□□□□□ -1.64
VPS8-214ENST00000458721 HNRNPCL1O60812 293 aaKnown RBP4.83□□□□□ -1.64
VPS8-214ENST00000458721 NCR1O76036 304 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 PRSS23O95084 383 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 MPZL1O95297 269 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 PTHP01270 115 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 IGHV2-5P01817 119 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 MYZAPP0CAP1 466 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 HNRNPCL4P0DMR1 293 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 ZNF250P15622 560 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 NCF2P19878 526 aaPredicted RBP4.83□□□□□ -1.64
VPS8-214ENST00000458721 CPT2P23786 658 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 PRTN3P24158 256 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 S100A3P33764 101 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 CRYBB2P43320 205 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 KLF3P57682 345 aaPredicted RBP4.83□□□□□ -1.64
VPS8-214ENST00000458721 TUBA1BP68363 451 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 TUBA4AP68366 448 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 EGR4Q05215 589 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 PUDPQ08623 228 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 ZP4Q12836 540 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 FADDQ13158 208 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 CAMK2DQ13557 499 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 C1DQ13901 141 aaKnown RBP4.83□□□□□ -1.64
VPS8-214ENST00000458721 ZMAT1Q5H9K5 638 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 ZNF311Q5JNZ3 666 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 SPANXN4Q5MJ08 99 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 GKAP1Q5VSY0 366 aaPredicted RBP4.83□□□□□ -1.64
VPS8-214ENST00000458721 RGS7BPQ6MZT1 257 aaPredicted RBP4.83□□□□□ -1.64
VPS8-214ENST00000458721 TMEM154Q6P9G4 183 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 UNQ6126/PRO20091Q6UXV3 157 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 ZNF813Q6ZN06 617 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 ZNF836Q6ZNA1 936 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 MSANTD1Q6ZTZ1 278 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 TUBA1AQ71U36 451 aa4.83□□□□□ -1.64
VPS8-214ENST00000458721 H1FNTQ75WM6 255 aaPredicted RBP4.83□□□□□ -1.64
VPS8-214ENST00000458721 DOK3Q7L591 496 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms