RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 NINJ1Q92982 152 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 HLA-CQ95604 372 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TSSK2Q96PF2 358 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TECTBQ96PL2 329 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 CMSS1Q9BQ75 279 aaKnown RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 RHNO1Q9BSD3 238 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 ST6GALNAC5Q9BVH7 336 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 GPR174Q9BXC1 333 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 CHST8Q9H2A9 424 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 IKZF5Q9H5V7 419 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 ZNF442Q9H7R0 627 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 CXorf36Q9H7Y0 433 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 ZNF286AQ9HBT8 521 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 CRLF2Q9HC73 371 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 SLC39A9Q9NUM3 307 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 RASL12Q9NYN1 266 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 FLVCR2Q9UPI3 526 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 ASB1Q9Y576 335 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 MAST2Q6P0Q8 1798 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 CLDN34H7C241 214 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 CYB5BO43169 146 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 PLPP2O43688 288 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 PTBP3O95758 552 aaKnown RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 EDN1P05305 212 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 HPNP05981 417 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 HOXD4P09016 255 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 CST2P09228 141 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TMEM11P17152 192 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TEAD1P28347 426 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 EPHA2P29317 976 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 ACTR1BP42025 376 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TPPP2P59282 170 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 NAAAQ02083 359 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 MSMO1Q15800 293 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 ZNF79Q15937 498 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TMEM31Q5JXX7 168 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 AGBL4Q5VU57 503 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 PAQR6Q6TCH4 344 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 GDF7Q7Z4P5 450 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TSLPQ969D9 159 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TOMM40LQ969M1 308 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 MAP3K3Q99759 626 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 WDR77Q9BQA1 342 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 ELOVL3Q9HB03 270 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 PDE7BQ9NP56 450 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TNFRSF12AQ9NP84 129 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 VSX1Q9NZR4 365 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 MTFP1Q9UDX5 166 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 ABT1Q9ULW3 272 aaKnown RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 GPR34Q9UPC5 381 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 EXOGQ9Y2C4 368 aaKnown RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 MYO18AQ92614 2054 aaKnown RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TBC1D3DA0A087WVF3 549 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TBC1D3IA0A087WXS9 549 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 CBY3A6NI87 242 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TBC1D3LB9A6J9 549 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 SERPINA7P05543 415 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TBC1D3HP0C7X1 549 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 LIPCP11150 499 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 SELPP16109 830 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 MAKP20794 623 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 DUSP1P28562 367 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 HOXA11P31270 313 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 CLDN12P56749 244 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 POLR2GP62487 172 aaKnown RBP eCLIP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 ACY1Q03154 408 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 FAM74A1Q5RGS3 127 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TBC1D3CQ6IPX1 549 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TCTN3Q6NUS6 607 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 USP50Q70EL3 339 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 P4HA3Q7Z4N8 544 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TBC1D3Q8IZP1 549 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 FAM58AQ8N1B3 248 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 OR4C16Q8NGL9 310 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 OR1S2Q8NGQ3 325 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 HMGCLL1Q8TB92 370 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 ATOH1Q92858 354 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TOE1Q96GM8 510 aaKnown RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 TMEM59Q9BXS4 323 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 MIXL1Q9H2W2 232 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 EPHX3Q9H6B9 360 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 HINT3Q9NQE9 182 aaKnown RBP4.62□□□□□ -1.67
PCDH9-203ENST00000456367 ELOVL2Q9NXB9 296 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 GJD2Q9UKL4 321 aa4.62□□□□□ -1.67
PCDH9-203ENST00000456367 A0A087WUU8 490 aa4.61□□□□□ -1.67
PCDH9-203ENST00000456367 A0A1W2PPV4 95 aa4.61□□□□□ -1.67
PCDH9-203ENST00000456367 ANKRD20A5PA0PJZ0 165 aa4.61□□□□□ -1.67
PCDH9-203ENST00000456367 MEIS3P2A8K0S8 358 aa4.61□□□□□ -1.67
PCDH9-203ENST00000456367 M0QYG6 137 aa4.61□□□□□ -1.67
PCDH9-203ENST00000456367 STC2O76061 302 aa4.61□□□□□ -1.67
PCDH9-203ENST00000456367 APBB3O95704 486 aa4.61□□□□□ -1.67
PCDH9-203ENST00000456367 NMBP08949 121 aa4.61□□□□□ -1.67
PCDH9-203ENST00000456367 OR8G3PP0DMU2 310 aa4.61□□□□□ -1.67
PCDH9-203ENST00000456367 SERPINA2P20848 420 aa4.61□□□□□ -1.67
PCDH9-203ENST00000456367 CASRP41180 1078 aa4.61□□□□□ -1.67
PCDH9-203ENST00000456367 ARRB1P49407 418 aaPredicted RBP4.61□□□□□ -1.67
PCDH9-203ENST00000456367 BLKP51451 505 aa4.61□□□□□ -1.67
PCDH9-203ENST00000456367 ZNF133P52736 654 aaPredicted RBP4.61□□□□□ -1.67
PCDH9-203ENST00000456367 SUMO1P63165 101 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms