RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 CXCR6O00574 342 aa18.41■□□□□ 0.54
HMGB3-205ENST00000455596 NME4O00746 187 aa18.41■□□□□ 0.54
HMGB3-205ENST00000455596 NUDT2P50583 147 aa18.41■□□□□ 0.54
HMGB3-205ENST00000455596 SLC7A2P52569 658 aa18.41■□□□□ 0.54
HMGB3-205ENST00000455596 SEC24CP53992 1094 aa18.41■□□□□ 0.54
HMGB3-205ENST00000455596 RPL18Q07020 188 aaKnown RBP18.41■□□□□ 0.54
HMGB3-205ENST00000455596 ADIPOQQ15848 244 aa18.41■□□□□ 0.54
HMGB3-205ENST00000455596 C8orf82Q6P1X6 216 aaPredicted RBP18.41■□□□□ 0.54
HMGB3-205ENST00000455596 A4GNTQ9UNA3 340 aa18.41■□□□□ 0.54
HMGB3-205ENST00000455596 NF1P21359 2839 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 IGHV2OR16-5A0A0B4J2B6 119 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 VSTM5A8MXK1 200 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 B9A039 149 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 NDUFAB1O14561 156 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 F13BP05160 661 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 OR4A8P0C604 315 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 PGA4P0DJD7 388 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 PGA3P0DJD8 388 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 EFNA4P52798 201 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 PPP2R2BQ00005 443 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 HGFACQ04756 655 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 PIGFQ07326 219 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 PIWIL3Q7Z3Z3 882 aaKnown RBP18.4■□□□□ 0.54
HMGB3-205ENST00000455596 OR10H5Q8NGA6 315 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 LIPHQ8WWY8 451 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 CMTM5Q96DZ9 223 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 NSRP1Q9H0G5 558 aaKnown RBP18.4■□□□□ 0.54
HMGB3-205ENST00000455596 DENND2DQ9H6A0 471 aaPredicted RBP18.4■□□□□ 0.54
HMGB3-205ENST00000455596 ZNF442Q9H7R0 627 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 INIPQ9NRY2 104 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 ZFHX3Q15911 3703 aa18.4■□□□□ 0.54
HMGB3-205ENST00000455596 IGHV4-30-2A0A087WSY4 118 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 MCIDASD6RGH6 385 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 ENTPD5O75356 428 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 UBL3O95164 117 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 ZNF682O95780 498 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 IGHG1P01857 330 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 IFNW1P05000 195 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 PCSK6P29122 969 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 GSK3BP49841 420 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 CLRN1P58418 232 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 EFNB3Q15768 340 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 CBLL1Q75N03 491 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 HDDC2Q7Z4H3 204 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 VTCN1Q7Z7D3 282 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 ZNF525Q8N782 197 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 FAM107BQ9H098 131 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 MYLK2Q9H1R3 596 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 NOX3Q9HBY0 568 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 ZNF224Q9NZL3 707 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 FKBP7Q9Y680 259 aa18.39■□□□□ 0.53
HMGB3-205ENST00000455596 HTR3EA5X5Y0 456 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 DHHO43323 396 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 PIP5K1CO60331 668 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 RAB36O95755 333 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 F12P00748 615 aaPredicted RBP18.38■□□□□ 0.53
HMGB3-205ENST00000455596 QDPRP09417 244 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 CSF3P09919 207 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 OR8G3PP0DMU2 310 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 ZNF14P17017 642 aaPredicted RBP18.38■□□□□ 0.53
HMGB3-205ENST00000455596 AQP2P41181 271 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 YAP1P46937 504 aaKnown RBP18.38■□□□□ 0.53
HMGB3-205ENST00000455596 PTDSS1P48651 473 aaKnown RBP18.38■□□□□ 0.53
HMGB3-205ENST00000455596 DAP3P51398 398 aaKnown RBP18.38■□□□□ 0.53
HMGB3-205ENST00000455596 RAB1AP62820 205 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 DAG1Q14118 895 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 IFI44LQ53G44 452 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 LRFN4Q6PJG9 635 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 GEMIN6Q8WXD5 167 aaKnown RBP18.38■□□□□ 0.53
HMGB3-205ENST00000455596 ASB10Q8WXI3 467 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 FAM168AQ92567 244 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 ZNF75AQ96N20 296 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 KCTD14Q9BQ13 255 aaPredicted RBP18.38■□□□□ 0.53
HMGB3-205ENST00000455596 FNDC11Q9BVV2 318 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 PLK3Q9H4B4 646 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 FBXO9Q9UK97 447 aaPredicted RBP18.38■□□□□ 0.53
HMGB3-205ENST00000455596 FBXL3Q9UKT7 428 aa18.38■□□□□ 0.53
HMGB3-205ENST00000455596 CENPBD1B2RD01 187 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 INAFM1C9JVW0 142 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 SERPINA1P01009 418 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 TP53P04637 393 aaPredicted RBP18.37■□□□□ 0.53
HMGB3-205ENST00000455596 TSPAN19P0C672 248 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 IFI30P13284 250 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 NPR2P20594 1047 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 PRDX6P30041 224 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 THBS4P35443 961 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 KRTAP1-1Q07627 177 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 SNTB2Q13425 540 aaKnown RBP18.37■□□□□ 0.53
HMGB3-205ENST00000455596 KRT80Q6KB66 452 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 FKBP9P1Q75LS8 142 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 CPLX4Q7Z7G2 160 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 SKA3Q8IX90 412 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 OFCC1Q8IZS5 231 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 SLC22A24Q8N4F4 322 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 NOXO1Q8NFA2 376 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 FAM162AQ96A26 154 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 BPIFA2Q96DR5 249 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 MS4A3Q96HJ5 214 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 SORCS2Q96PQ0 1159 aa18.37■□□□□ 0.53
HMGB3-205ENST00000455596 VRK1Q99986 396 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms