RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 QPCTLQ9NXS2 382 aa3.1□□□□□ -1.91
HMGN3P1-201ENST00000453847 CLCF1Q9UBD9 225 aa3.1□□□□□ -1.91
HMGN3P1-201ENST00000453847 TRAF3IP3Q9Y228 551 aa3.1□□□□□ -1.91
HMGN3P1-201ENST00000453847 N6AMT1Q9Y5N5 214 aa3.1□□□□□ -1.91
HMGN3P1-201ENST00000453847 CACNA1FO60840 1977 aa3.1□□□□□ -1.91
HMGN3P1-201ENST00000453847 UBN2Q6ZU65 1347 aa3.1□□□□□ -1.91
HMGN3P1-201ENST00000453847 LRRK1Q38SD2 2015 aa3.1□□□□□ -1.91
HMGN3P1-201ENST00000453847 MSH6P52701 1360 aa3.1□□□□□ -1.91
HMGN3P1-201ENST00000453847 PIK3R4Q99570 1358 aa3.1□□□□□ -1.91
HMGN3P1-201ENST00000453847 A0A0J9YYE9 177 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 USP27XA6NNY8 438 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 C12orf77C9JDV5 145 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 NDUFS8O00217 210 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 SOX15O60248 233 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF780AO75290 641 aaPredicted RBP3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 CLDN11O75508 207 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 TRBC1P01850 177 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 MBP02144 154 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 IFNW1P05000 195 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 STAG3L2P0CL84 134 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 SLC2A5P22732 501 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 GATA2P23769 480 aaPredicted RBP3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 RPL34P49207 117 aaKnown RBP3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 MEOX2P50222 304 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 SSR4P51571 173 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 YWHAGP61981 247 aaKnown RBP eCLIP3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 ERVK-25P63136 954 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 HNRNPA1L2Q32P51 320 aaKnown RBP3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 FHL5Q5TD97 284 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 C1orf146Q5VVC0 180 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 RNLSQ5VYX0 342 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF620Q6ZNG0 422 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF571Q7Z3V5 609 aaPredicted RBP3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 VTCN1Q7Z7D3 282 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF589Q86UQ0 364 aaPredicted RBP3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 THOC6Q86W42 341 aaKnown RBP3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 CDC20BQ86Y33 519 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 SLC39A11Q8N1S5 342 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 EID2Q8N6I1 236 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 TMEM252Q8N6L7 170 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 FAM86B1Q8N7N1 296 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 OR10H4Q8NGA5 316 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 TYMSOSQ8TAI1 123 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF502Q8TBZ5 544 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 MITD1Q8WV92 249 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 OR1E3Q8WZA6 343 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 STMN2Q93045 179 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 TMEM54Q969K7 222 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 RPUSD4Q96CM3 377 aaKnown RBP3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 LRRC58Q96CX6 371 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 C19orf60Q96EN9 201 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 MED8Q96G25 268 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 COL21A1Q96P44 957 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 KIR2DL4Q99706 377 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 NAT9Q9BTE0 207 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 PAXXQ9BUH6 204 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 RIOK2Q9BVS4 552 aaKnown RBP3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 IL22Q9GZX6 179 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 HAUS4Q9H6D7 363 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 STOX2Q9P2F5 926 aaPredicted RBP3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 UXTQ9UBK9 157 aaPredicted RBP3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 DCDC2Q9UHG0 476 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 GNPTGQ9UJJ9 305 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 FANCIQ9NVI1 1328 aa3.09□□□□□ -1.91
HMGN3P1-201ENST00000453847 CHD4Q14839 1912 aa3.09□□□□□ -1.92
HMGN3P1-201ENST00000453847 COL22A1Q8NFW1 1626 aaPredicted RBP3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 KRTAP4-16G5E9R7 235 aaPredicted RBP3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 M0R3G1 203 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 TBL1XO60907 577 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 EEDO75530 441 aaKnown RBP3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 EIF3GO75821 320 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 HLA-HP01893 362 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 P0C879 139 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 TCN1P20061 433 aaPredicted RBP3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 CD82P27701 267 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 NTSP30990 170 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 FOXN2P32314 431 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 CFHR2P36980 270 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 VDAC2P45880 294 aaPredicted RBP3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 GPR6P46095 362 aaPredicted RBP3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 ARRB1P49407 418 aaPredicted RBP3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 DLX1P56177 255 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 ACTA2P62736 377 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 ACTG2P63267 376 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 ACTC1P68032 377 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 ACTA1P68133 377 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 CSNK1G2P78368 415 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 SLC25A11Q02978 314 aaKnown RBP3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 GSG1Q2KHT4 349 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 GPR157Q5UAW9 335 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 H3F3CQ6NXT2 135 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 Q6ZTC4 211 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 CEND1Q8N111 149 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 PDIK1LQ8N165 341 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 CADM2Q8N3J6 435 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZADH2Q8N4Q0 377 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR51S1Q8NGJ8 323 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR4A15Q8NGL6 344 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR8K3Q8NH51 312 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms