RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 SMARCD3Q6STE5 483 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 AAED1Q7RTV5 226 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 SVOPLQ8N434 492 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 CBR4Q8N4T8 237 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 CLDN22Q8N7P3 220 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 ATG16L2Q8NAA4 619 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 ANKK1Q8NFD2 765 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 ZNF519Q8TB69 540 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 NRG4Q8WWG1 115 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 ASB10Q8WXI3 467 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 NMD3Q96D46 503 aaKnown RBP13.81□□□□□ -0.2
VCX3B-204ENST00000453306 ZNF837Q96EG3 531 aaPredicted RBP13.81□□□□□ -0.2
VCX3B-204ENST00000453306 Q96M85 177 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 GPX7Q96SL4 187 aaPredicted RBP13.81□□□□□ -0.2
VCX3B-204ENST00000453306 NRIP3Q9NQ35 241 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 SLC7A10Q9NS82 523 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 STX18Q9P2W9 335 aaKnown RBP13.81□□□□□ -0.2
VCX3B-204ENST00000453306 RRP15Q9Y3B9 282 aaKnown RBP13.81□□□□□ -0.2
VCX3B-204ENST00000453306 CDH10Q9Y6N8 788 aa13.81□□□□□ -0.2
VCX3B-204ENST00000453306 DLGAP1O14490 977 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 BHLHE40O14503 412 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 GPR171O14626 319 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 EI24O14681 340 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 GOSR1O95249 250 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 PPP1R3DO95685 299 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 IGHMP01871 453 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 CD14P08571 375 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 CD8BP10966 210 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 OPRM1P35372 400 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 BIDP55957 195 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 COX10Q12887 443 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 CAMK2DQ13557 499 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 SNTB1Q13884 538 aaKnown RBP13.8□□□□□ -0.2
VCX3B-204ENST00000453306 DAZAP2Q15038 168 aaPredicted RBP13.8□□□□□ -0.2
VCX3B-204ENST00000453306 ANKDD1AQ495B1 522 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 SLC36A3Q495N2 470 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 CLEC12AQ5QGZ9 265 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 CARD17Q5XLA6 110 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 ACSM5Q6NUN0 579 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 NIPAL3Q6P499 406 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 CDC20BQ86Y33 519 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 IQCF1Q8N6M8 205 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 FANK1Q8TC84 345 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 HDAC2Q92769 488 aaKnown RBP13.8□□□□□ -0.2
VCX3B-204ENST00000453306 MBD6Q96DN6 1003 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 DDOQ99489 341 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 MRPL13Q9BYD1 178 aaKnown RBP13.8□□□□□ -0.2
VCX3B-204ENST00000453306 TXNIPQ9H3M7 391 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 KRCC1Q9NPI7 259 aaPredicted RBP13.8□□□□□ -0.2
VCX3B-204ENST00000453306 EMC3Q9P0I2 261 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 EMC9Q9Y3B6 208 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 IER3IP1Q9Y5U9 82 aa13.8□□□□□ -0.2
VCX3B-204ENST00000453306 MED12LQ86YW9 2145 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 MAP1AP78559 2803 aaPredicted RBP13.79□□□□□ -0.2
VCX3B-204ENST00000453306 SPG11Q96JI7 2443 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 IGKV1D-43A0A0B4J1Z2 117 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 TUBAL3A6NHL2 446 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 E9PQ18 207 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 MRPL33O75394 65 aaKnown RBP13.79□□□□□ -0.2
VCX3B-204ENST00000453306 TRMUO75648 421 aaKnown RBP13.79□□□□□ -0.2
VCX3B-204ENST00000453306 SMNDC1O75940 238 aaKnown RBP eCLIP13.79□□□□□ -0.2
VCX3B-204ENST00000453306 TXNDC12O95881 172 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 ALPLP05186 524 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 OSMP13725 252 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 FOSL1P15407 271 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 PRPS1P60891 318 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 RPL27P61353 136 aaKnown RBP13.79□□□□□ -0.2
VCX3B-204ENST00000453306 TOP3AQ13472 1001 aaPredicted RBP13.79□□□□□ -0.2
VCX3B-204ENST00000453306 DAG1Q14118 895 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 MESTQ5EB52 335 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 TMEM236Q5W0B7 351 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 LRFN4Q6PJG9 635 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 CASP12Q6UXS9 341 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 DPY19L2P2Q6ZN68 376 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 LUZP2Q86TE4 346 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 C20orf196Q8IYI0 205 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 GABRG1Q8N1C3 465 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 OR6X1Q8NH79 312 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 RASD2Q96D21 266 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 TSSK6Q9BXA6 273 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 LIME1Q9H400 295 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 DCLRE1BQ9H816 532 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 RNPEPL1Q9HAU8 725 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 USE1Q9NZ43 259 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 PROCRQ9UNN8 238 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 RCE1Q9Y256 329 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 PLEKHA6Q9Y2H5 1048 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 DOCK7Q96N67 2140 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 ALPK2Q86TB3 2170 aa13.79□□□□□ -0.2
VCX3B-204ENST00000453306 NPIPB13A6NJU9 1138 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 NPIPB4C9JG80 1138 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 MSTNO14793 375 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 CASQ2O14958 399 aaPredicted RBP13.78□□□□□ -0.2
VCX3B-204ENST00000453306 BCL10O95999 233 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 PGA4P0DJD7 388 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 PGA3P0DJD8 388 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 EPXP11678 715 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 GSTM3P21266 225 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 PEX2P28328 305 aa13.78□□□□□ -0.2
VCX3B-204ENST00000453306 RPL4P36578 427 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms