RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 LRP11Q86VZ4 500 aa12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 CPEB3Q8NE35 698 aaKnown RBP12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 ZNF519Q8TB69 540 aa12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 SYNPRQ8TBG9 265 aa12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 RAB1CQ92928 201 aa12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 SLC47A1Q96FL8 570 aa12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 SORT1Q99523 831 aa12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 GPA33Q99795 319 aa12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 BCL2L14Q9BZR8 327 aa12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 A4GALTQ9NPC4 353 aa12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 SELENONQ9NZV5 590 aa12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 MYEF2Q9P2K5 600 aaKnown RBP12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 TESQ9UGI8 421 aaKnown RBP12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 PCDHGB1Q9Y5G3 927 aa12.2□□□□□ -0.46
LYSMD3-202ENST00000453259 POM121CA8CG34 1229 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 MS4A18H0YCH9 400 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 PRSS23O95084 383 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 FARS2O95363 451 aaKnown RBP12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 MT-ATP6P00846 226 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 OR8G3PP0DMU2 310 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 BMP2P12643 396 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 IL12AP29459 219 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 RAD52P43351 418 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 SLC3A1Q07837 685 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 ZP4Q12836 540 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 OCLNQ16625 522 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 HFEQ30201 348 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 MS4A18Q3C1V0 323 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 NHLRC1Q6VVB1 395 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 BHLHE22Q8NFJ8 381 aaPredicted RBP12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 OR1J2Q8NGS2 313 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 C11orf40Q8WZ69 217 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 ITCHQ96J02 903 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 SPATA5L1Q9BVQ7 753 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 LRMDAQ9H2I8 198 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 ESM1Q9NQ30 184 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 TCF7L2Q9NQB0 619 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 TAAR3PQ9P1P4 343 aa12.19□□□□□ -0.46
LYSMD3-202ENST00000453259 IGKV1D-42A0A075B6H8 117 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 A0A0G2JK05 382 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 A0A1B0GWA3 101 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 TRPC5OSA6NMA1 111 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 PRTN3P24158 256 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 MAGEB1P43366 347 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 CSNK1A1P48729 337 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 NCALDP61601 193 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 CCL8P80075 99 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 RBBP4Q09028 425 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 PMS2P3Q13401 168 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 RAB39AQ14964 217 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 RPS26P11Q5JNZ5 115 aaPredicted RBP12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 CARD17Q5XLA6 110 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 TREML4Q6UXN2 200 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 UNQ6126/PRO20091Q6UXV3 157 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 KRT73Q86Y46 540 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 ZNF584Q8IVC4 421 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 C1orf174Q8IYL3 243 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 SLC30A7Q8NEW0 376 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 POP5Q969H6 163 aaKnown RBP12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 ELMOD3Q96FG2 381 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 PKNOX2Q96KN3 472 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 TMEM43Q9BTV4 400 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 TMEM109Q9BVC6 243 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 C7orf69Q9H7B7 122 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 SAP30LQ9HAJ7 183 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 DECR2Q9NUI1 292 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 CGGBP1Q9UFW8 167 aaPredicted RBP12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 WIPI2Q9Y4P8 454 aa12.18□□□□□ -0.46
LYSMD3-202ENST00000453259 C5orf58C9J3I9 102 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 SDHDO14521 159 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 SLC22A3O75751 556 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 HPRP00739 348 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 NME5P56597 212 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 IL13RA1P78552 427 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 MVKQ03426 396 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 TBC1D28Q2M2D7 210 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 SLC36A2Q495M3 483 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 TMEM53Q6P2H8 277 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 DHRS4L2Q6PKH6 230 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 DOK3Q7L591 496 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 SLC22A24Q8N4F4 322 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 OR6X1Q8NH79 312 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 DVL3Q92997 716 aaPredicted RBP12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 EMC6Q9BV81 110 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 C20orf27Q9GZN8 174 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 SLITRK2Q9H156 845 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 CDH20Q9HBT6 801 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 SLC6A13Q9NSD5 602 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 MED29Q9NX70 200 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 ZIM2Q9NZV7 527 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 FZR1Q9UM11 496 aa12.17□□□□□ -0.46
LYSMD3-202ENST00000453259 PRORSD1PA6NEY8 169 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 CLDN34H7C241 214 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 PLPP3O14495 311 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 HDAC3O15379 428 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 CDC14BO60729 498 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 FOXH1O75593 365 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 MFN2O95140 757 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 IGHV3-13P01766 116 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 BGLAPP02818 100 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms