RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 NAA11Q9BSU3 229 aaPredicted RBP15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 ADI1Q9BV57 179 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 GABARAPL3Q9BY60 117 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 Q9H521 79 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 RAB26Q9ULW5 256 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 TRAPPC4Q9Y296 219 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 RAI1Q7Z5J4 1906 aaPredicted RBP15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 CIB4A0PJX0 185 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 ZNF716A6NP11 495 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 CXCR1P25024 350 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 FPR3P25089 353 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 OMPP47874 163 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 MAP2K6P52564 334 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 RPS4XP62701 263 aaKnown RBP15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 LTBQ06643 244 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 BSPH1Q075Z2 132 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 TIMM23BQ5SRD1 257 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 ADAM5Q6NVV9 412 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 TTC33Q6PID6 262 aaPredicted RBP15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 C5orf46Q6UWT4 87 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 CD300LDQ6UXZ3 194 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 SSX8Q7RTT4 187 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 ZER1Q7Z7L7 766 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 GNPDA2Q8TDQ7 276 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 NIPSNAP1Q9BPW8 284 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 LRRC42Q9Y546 428 aa15.86■□□□□ 0.13
SQSTM1-204ENST00000453046 TRIM64A6NGJ6 449 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 TRIM64BA6NI03 449 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 H0YAE9 185 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 PIP5K1CO60331 668 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 RAD51DO75771 328 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 SNAP29O95721 258 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 GASTP01350 101 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 ACADSP16219 412 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 HOXB4P17483 251 aaPredicted RBP15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 COX5AP20674 150 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 GSSP48637 474 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 ATP5J2P56134 94 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 PRKCDQ05655 676 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 COX10Q12887 443 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 TSPAN31Q12999 210 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 CASP12Q6UXS9 341 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 P2RY8Q86VZ1 359 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 CIARTQ8N365 385 aaPredicted RBP15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 ZNF433Q8N7K0 673 aaPredicted RBP15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 LILRB1Q8NHL6 650 aaPredicted RBP15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 SMAP2Q8WU79 429 aaPredicted RBP15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 IGFBPL1Q8WX77 278 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 COX4I2Q96KJ9 171 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 TOR3AQ9H497 397 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 ASB6Q9NWX5 421 aa15.85■□□□□ 0.13
SQSTM1-204ENST00000453046 USF3Q68DE3 2245 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 IGKV1D-42A0A075B6H8 117 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 DPRXA6NFQ7 191 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 OR5H1A6NKK0 313 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 RAMP1O60894 148 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 IMPDH2P12268 514 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 PAX1P15863 534 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 CAPGP40121 348 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 SLC16A1P53985 500 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 FAPQ12884 760 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 KRTAP21-3Q3LHN1 58 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 ZNF672Q499Z4 452 aaPredicted RBP15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 KLHL17Q6TDP4 642 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 DHRSXQ8N5I4 330 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 KBTBD8Q8NFY9 601 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 PFN4Q8NHR9 129 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 NEUROG1Q92886 237 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 GTPBP3Q969Y2 492 aaKnown RBP15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 TRMT61AQ96FX7 289 aaKnown RBP15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 FAM46AQ96IP4 442 aaKnown RBP15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 MBOAT4Q96T53 435 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 ZNF701Q9NV72 531 aaPredicted RBP15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 PARPBPQ9NWS1 579 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 UPB1Q9UBR1 384 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 NAV3Q8IVL0 2385 aa15.84■□□□□ 0.13
SQSTM1-204ENST00000453046 ZC3H12DA2A288 527 aaKnown RBP15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 KPNA4O00629 521 aaPredicted RBP15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 MITFO75030 526 aaPredicted RBP15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 HEXAP06865 529 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 IFI30P13284 250 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 OSMP13725 252 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 IDUAP35475 653 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 GPR4P46093 362 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 ESRRGP62508 458 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 LSM11P83369 360 aaKnown RBP eCLIP15.83■□□□□ 0.122e-6■■□□□ 13.3
SQSTM1-204ENST00000453046 H3F3AP84243 136 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 IL1RL1Q01638 556 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 TAF11Q15544 211 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 TTC23Q5W5X9 447 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 TMPRSS11FQ6ZWK6 438 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 CDK20Q8IZL9 346 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 CLDN22Q8N7P3 220 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 ZNF555Q8NEP9 628 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 OR52N5Q8NH56 324 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 STK35Q8TDR2 534 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 TFAP2CQ92754 450 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 BPIFA2Q96DR5 249 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 TAPBPLQ9BX59 468 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 RIBC2Q9H4K1 309 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms