RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 GALK2Q01415 458 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 PMS2P3Q13401 168 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 OR1Q1Q15612 314 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 ALKBH6Q3KRA9 238 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 LRIF1Q5T3J3 769 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 GCNT6Q5T4J0 391 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 REEP3Q6NUK4 255 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 WDR88Q6ZMY6 472 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 PXKQ7Z7A4 578 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 FUNDC1Q8IVP5 155 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 MIER2Q8N344 545 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 PAQR4Q8N4S7 273 aaPredicted RBP7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 GOLGA6L1Q8N7Z2 621 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 OR6N1Q8NGY5 312 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 OR51F2Q8NH61 342 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 TSPAN32Q96QS1 320 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 DENND2DQ9H6A0 471 aaPredicted RBP7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 ZNF385DQ9H6B1 395 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 B3GAT2Q9NPZ5 323 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 G6PC2Q9NQR9 355 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 SLC7A8Q9UHI5 535 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 DUSP13Q9UII6 198 aa7.55□□□□□ -1.2
DEPDC1B-202ENST00000453022 LOC105371242A0A075B767 164 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 TRBV5-3A0A0A0MS03 114 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 A0A1W2PPW3 197 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 PPIHO43447 177 aaKnown RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 ZNF500O60304 480 aaPredicted RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 PNPP00491 289 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 SERPINA5P05154 406 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 EGR1P18146 543 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 AHCYP23526 432 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 AQP1P29972 269 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 CSNK1A1P48729 337 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 ARFIP2P53365 341 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 BIDP55957 195 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 TMEM33P57088 247 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 RGS8P57771 180 aaPredicted RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 HILS1P60008 231 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 ERVS71-1P61550 626 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 NCALDP61601 193 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 ACTG1P63261 375 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 CDK6Q00534 326 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 AVPI1Q5T686 147 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 REP15Q6BDI9 236 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 SHQ1Q6PI26 577 aaKnown RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 SLC22A24Q8N4F4 322 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 RNF217Q8TC41 542 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 TMEM54Q969K7 222 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 TRIM44Q96DX7 344 aaPredicted RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 EPYCQ99645 322 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 TMEM43Q9BTV4 400 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 PARD6BQ9BYG5 372 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 SLC52A3Q9NQ40 469 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 VAPAQ9P0L0 249 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 GRIP1Q9Y3R0 1128 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 GMEB1Q9Y692 573 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 IGLV3-9A0A075B6K5 115 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 TRAV20A0A0B4J274 112 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 TMEM89A2RUT3 159 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 ZNF726A6NNF4 738 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 C11orf98E9PRG8 122 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 CDC14BO60729 498 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 DEAF1O75398 565 aaPredicted RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 LYPD3O95274 346 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 THY1P04216 161 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 FAM157BP0CG42 384 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 ADORA3P0DMS8 318 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 CCL2P13500 99 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 EPHA1P21709 976 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 MRPL19P49406 292 aaKnown RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 CCL8P80075 99 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 SCARB2Q14108 478 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 NKPD1Q17RQ9 610 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 PAGE3Q5JUK9 113 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 RGS7BPQ6MZT1 257 aaPredicted RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 FAHD2BQ6P2I3 314 aaPredicted RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 LINC00114Q6XXX2 140 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 USP43Q70EL4 1123 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 PIWIL3Q7Z3Z3 882 aaKnown RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 PEG10Q86TG7 708 aaKnown RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 TSPYL5Q86VY4 417 aaPredicted RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 SNX32Q86XE0 403 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 KRT73Q86Y46 540 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 C10orf53Q8N6V4 93 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 OR5J2Q8NH18 312 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 OR6X1Q8NH79 312 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 ZNF418Q8TF45 676 aaPredicted RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 FAM216AQ8WUB2 273 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 GTF3AQ92664 365 aaKnown RBP7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 FAHD2AQ96GK7 314 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 SH3GL3Q99963 347 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 SPATA5L1Q9BVQ7 753 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 ZNF416Q9BWM5 594 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 TMPRSS13Q9BYE2 586 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 OR51B6Q9H340 312 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 TMEM38AQ9H6F2 299 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 ZNF665Q9H7R5 613 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 TMEM27Q9HBJ8 222 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 TMEM38BQ9NVV0 291 aa7.54□□□□□ -1.2
DEPDC1B-202ENST00000453022 TAS2R5Q9NYW4 299 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms