RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 ARAFP10398 606 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 ACHEP22303 614 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 COL8A2P25067 703 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 GLRXP35754 106 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 GSK3BP49841 420 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 TMEM33P57088 247 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 MRPS11P82912 194 aaKnown RBP10.03□□□□□ -0.8
HERC3-207ENST00000452979 IL1RL1Q01638 556 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 LIPEQ05469 1076 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 LARS2Q15031 903 aaKnown RBP10.03□□□□□ -0.8
HERC3-207ENST00000452979 CYP51A1Q16850 503 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 MSMPQ1L6U9 139 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 CEACAM16Q2WEN9 425 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 RPS26P11Q5JNZ5 115 aaPredicted RBP10.03□□□□□ -0.8
HERC3-207ENST00000452979 KRT80Q6KB66 452 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 CCDC121Q6ZUS5 278 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 USP43Q70EL4 1123 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 ZNF627Q7L945 461 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 TMEM123Q8N131 208 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 GPR137CQ8N3F9 429 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 RNF148Q8N7C7 305 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 PIK3C3Q8NEB9 887 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 CLDND2Q8NHS1 167 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 SLC38A5Q8WUX1 472 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 RDH5Q92781 318 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 SLC35B4Q969S0 331 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 SLC25A36Q96CQ1 311 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 ZNF583Q96ND8 569 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 OR2M2Q96R28 347 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 SH3GL1Q99961 368 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 SPATA9Q9BWV2 254 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 MRPL37Q9BZE1 423 aaKnown RBP10.03□□□□□ -0.8
HERC3-207ENST00000452979 LRMDAQ9H2I8 198 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 TPK1Q9H3S4 243 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 RAD21L1Q9H4I0 556 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 C12orf10Q9HB07 376 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 A4GALTQ9NPC4 353 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 HIF1ANQ9NWT6 349 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 NDE1Q9NXR1 346 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 P2RX2Q9UBL9 471 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 ZNF232Q9UNY5 417 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 ZNF443Q9Y2A4 671 aaPredicted RBP10.03□□□□□ -0.8
HERC3-207ENST00000452979 GRIP1Q9Y3R0 1128 aa10.03□□□□□ -0.8
HERC3-207ENST00000452979 A0A0G2JPF8 293 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 HNRNPCL2B2RXH8 293 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 HNRNPCL3B7ZW38 293 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 M0R233 179 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 OR2T1O43869 369 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 HNRNPCL1O60812 293 aaKnown RBP10.02□□□□□ -0.81
HERC3-207ENST00000452979 TFP02787 698 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 HPXP02790 462 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 BCHEP06276 602 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 HNRNPCL4P0DMR1 293 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 ZNF14P17017 642 aaPredicted RBP10.02□□□□□ -0.81
HERC3-207ENST00000452979 GPR6P46095 362 aaPredicted RBP10.02□□□□□ -0.81
HERC3-207ENST00000452979 RPS5P46782 204 aaKnown RBP10.02□□□□□ -0.81
HERC3-207ENST00000452979 CRISP3P54108 245 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 HILS1P60008 231 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 NPRL3Q12980 569 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 FXNQ16595 210 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 ZSCAN26Q16670 478 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 PHYHD1Q5SRE7 291 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 NHLRC1Q6VVB1 395 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 ASRGL1Q7L266 308 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 CARM1Q86X55 608 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 C3orf56Q8N813 242 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 FAM156AQ8NDB6 213 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 NFKBIDQ8NI38 313 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 ZNF418Q8TF45 676 aaPredicted RBP10.02□□□□□ -0.81
HERC3-207ENST00000452979 KTI12Q96EK9 354 aaPredicted RBP10.02□□□□□ -0.81
HERC3-207ENST00000452979 TMEM19Q96HH6 336 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 CLPTM1LQ96KA5 538 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 LRR1Q96L50 414 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 BTBD10Q9BSF8 475 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 DENND2DQ9H6A0 471 aaPredicted RBP10.02□□□□□ -0.81
HERC3-207ENST00000452979 TMEM38AQ9H6F2 299 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 ARMC7Q9H6L4 198 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 ADA2Q9NZK5 511 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 SEC14L4Q9UDX3 406 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 CD300AQ9UGN4 299 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 PCDHB10Q9UN67 800 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 MEGF8Q7Z7M0 2845 aa10.02□□□□□ -0.81
HERC3-207ENST00000452979 TRAV20A0A0B4J274 112 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 MS4A18H0YCH9 400 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 WNT9BO14905 357 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 GYG2O15488 501 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 ATP5HO75947 161 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 HLA-HP01893 362 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 GAAP10253 952 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 GTF2E2P29084 291 aaKnown RBP10.01□□□□□ -0.81
HERC3-207ENST00000452979 PCGF2P35227 344 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 CRYBA2P53672 197 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 LMO4P61968 165 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 CDK6Q00534 326 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 C1DQ13901 141 aaKnown RBP10.01□□□□□ -0.81
HERC3-207ENST00000452979 SCARB2Q14108 478 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 GSG1Q2KHT4 349 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 VMACQ2NL98 169 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 MS4A18Q3C1V0 323 aa10.01□□□□□ -0.81
HERC3-207ENST00000452979 DNAL1Q4LDG9 190 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms