RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CDC20Q12834 499 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 DPYSL3Q14195 570 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 MESDQ14696 234 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 SYPL1Q16563 259 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 ECSCRQ19T08 205 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 DEFB109BQ30KR1 87 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 GGTA1PQ4G0N0 100 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 PHYHD1Q5SRE7 291 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.59□□□□□ -1.83
LINC00393-202ENST00000452852 HENMT1Q5T8I9 393 aaKnown RBP3.59□□□□□ -1.83
LINC00393-202ENST00000452852 NCBP2-AS2Q69YL0 99 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 LEG1Q6P5S2 330 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 BHLHB9Q6PI77 547 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 KCNIP4Q6PIL6 250 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 LANCL3Q6ZV70 420 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 H2AFVQ71UI9 128 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 BZW1Q7L1Q6 419 aaKnown RBP3.59□□□□□ -1.83
LINC00393-202ENST00000452852 C16orf62Q7Z3J2 963 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 KCNMB4Q86W47 210 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 TRAPPC5Q8IUR0 188 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 VSTM4Q8IW00 320 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 KLHDC8BQ8IXV7 354 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 TMEM123Q8N131 208 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 ZNF671Q8TAW3 534 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 NANPQ8TBE9 248 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 BRSK1Q8TDC3 778 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 PCNPQ8WW12 178 aaKnown RBP3.59□□□□□ -1.83
LINC00393-202ENST00000452852 HTR3CQ8WXA8 447 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 STARD8Q92502 1023 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 EMG1Q92979 244 aaKnown RBP3.59□□□□□ -1.83
LINC00393-202ENST00000452852 CXorf40BQ96DE9 158 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 ELMO2Q96JJ3 720 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 SLC45A3Q96JT2 553 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 C9orf72Q96LT7 481 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 NSMCE3Q96MG7 304 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 AGAP3Q96P47 875 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 TGM7Q96PF1 710 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 LYSMD1Q96S90 227 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 TTYH2Q9BSA4 534 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 DGCR6LQ9BY27 220 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 OR2AG1Q9H205 316 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 NT5DC2Q9H857 520 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 METTL7AQ9H8H3 244 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 APMAPQ9HDC9 416 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 DCAF13Q9NV06 445 aaKnown RBP3.59□□□□□ -1.83
LINC00393-202ENST00000452852 KLRF1Q9NZS2 232 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 CRLS1Q9UJA2 301 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.59□□□□□ -1.83
LINC00393-202ENST00000452852 GSTK1Q9Y2Q3 226 aa3.59□□□□□ -1.83
LINC00393-202ENST00000452852 ASH1LQ9NR48 2969 aaKnown RBP3.59□□□□□ -1.84
LINC00393-202ENST00000452852 FASNP49327 2511 aaKnown RBP3.59□□□□□ -1.84
LINC00393-202ENST00000452852 TNRC6AQ8NDV7 1962 aaKnown RBP3.58□□□□□ -1.84
LINC00393-202ENST00000452852 HELTA6NFD8 242 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 ZNF487B1APH4 448 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 BLOC1S5-TXNDC5H3BN57 136 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 STX7O15400 261 aaKnown RBP3.58□□□□□ -1.84
LINC00393-202ENST00000452852 TOX3O15405 576 aaPredicted RBP3.58□□□□□ -1.84
LINC00393-202ENST00000452852 ZNF749O43361 778 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 SPOPO43791 374 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 PCDH7O60245 1069 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 MTRF1O75570 445 aaKnown RBP3.58□□□□□ -1.84
LINC00393-202ENST00000452852 CDK14O94921 469 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 CFC1BP0CG36 223 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 CFC1P0CG37 223 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 ZNF7P17097 686 aaPredicted RBP3.58□□□□□ -1.84
LINC00393-202ENST00000452852 XRCC1P18887 633 aaPredicted RBP3.58□□□□□ -1.84
LINC00393-202ENST00000452852 TPSB2P20231 275 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 IDSP22304 550 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 KDELR1P24390 212 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 UCP1P25874 307 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 PDHA2P29803 388 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 SAA4P35542 130 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 GRIA1P42261 906 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 ATP5OP48047 213 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 PLA2G16P53816 162 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 GFERP55789 205 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 DYNLT1P63172 113 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 EWSR1Q01844 656 aaKnown RBP eCLIP3.58□□□□□ -1.84
LINC00393-202ENST00000452852 PPIDQ08752 370 aaKnown RBP3.58□□□□□ -1.84
LINC00393-202ENST00000452852 KLRB1Q12918 225 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 BNIP1Q12981 228 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 TFDP2Q14188 446 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 TPSAB1Q15661 275 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 UBE2V2Q15819 145 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 MRGPRG-AS1Q2M3A8 158 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 PWWP2BQ6NUJ5 590 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 ATRAIDQ6UW56 229 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 BTNL3Q6UXE8 466 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 HACD2Q6Y1H2 254 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 ADAMTSL5Q6ZMM2 481 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 FAM92BQ6ZTR7 304 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 CYS1Q717R9 158 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 TRAM1L1Q8N609 369 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 ZNRF1Q8ND25 227 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 TFB1MQ8WVM0 346 aaKnown RBP3.58□□□□□ -1.84
LINC00393-202ENST00000452852 LRRC45Q96CN5 670 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 FAF2Q96CS3 445 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 RNF157Q96PX1 679 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 SMIM14Q96QK8 99 aa3.58□□□□□ -1.84
LINC00393-202ENST00000452852 CCDC77Q9BR77 488 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms