RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 BOD1Q96IK1 185 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 DHRS1Q96LJ7 313 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 RDH12Q96NR8 316 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 ALPK1Q96QP1 1244 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 TNFRSF13CQ96RJ3 184 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 GPR35Q9HC97 309 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 MOV10Q9HCE1 1003 aaKnown RBP7.81□□□□□ -1.16
COL8A1-203ENST00000452013 OBP2BQ9NPH6 170 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 MED29Q9NX70 200 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 MYRFQ9Y2G1 1151 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 POFUT2Q9Y2G5 429 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 HIF3AQ9Y2N7 669 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 AMDHD2Q9Y303 409 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 MAGED1Q9Y5V3 778 aaPredicted RBP7.81□□□□□ -1.16
COL8A1-203ENST00000452013 MYO7BQ6PIF6 2116 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 NCOA6Q14686 2063 aaPredicted RBP7.8□□□□□ -1.16
COL8A1-203ENST00000452013 A0A087WXM4 84 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 TRBV4-1A0A0J9YWV2 114 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 DHRS12A0PJE2 317 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 SH3PXD2BA1X283 911 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 NPIPB13A6NJU9 1138 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 DEFB108AA8MXU0 73 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 CENPBD1B2RD01 187 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 NPIPB4C9JG80 1138 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 M0R3G1 203 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 TNFRSF11BO00300 401 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 CLOCKO15516 846 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 PIP5K1CO60331 668 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 OR10H3O60404 316 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 IGHG1P01857 330 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 F13BP05160 661 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 TSPAN19P0C672 248 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 SMIM18P0DKX4 95 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 RAP2AP10114 183 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 NR2C1P13056 603 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 RRM2P31350 389 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 FOXG1P55316 489 aaPredicted RBP7.8□□□□□ -1.16
COL8A1-203ENST00000452013 KRTAP10-9P60411 292 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 CTXN1P60606 82 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 UBE2NP61088 152 aaKnown RBP7.8□□□□□ -1.16
COL8A1-203ENST00000452013 ESRRGP62508 458 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 LSM11P83369 360 aaKnown RBP eCLIP7.8□□□□□ -1.16
COL8A1-203ENST00000452013 ARF1P84077 181 aaKnown RBP7.8□□□□□ -1.16
COL8A1-203ENST00000452013 GTF3C1Q12789 2109 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 ACKR1Q16570 336 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 FOXB2Q5VYV0 432 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 OR4K5Q8NGD3 323 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 OR1K1Q8NGR3 316 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 OR52N5Q8NH56 324 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 MOSPD2Q8NHP6 518 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 MAGEE2Q8TD90 523 aaPredicted RBP7.8□□□□□ -1.16
COL8A1-203ENST00000452013 GNPDA2Q8TDQ7 276 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 BCL2L2Q92843 193 aaPredicted RBP7.8□□□□□ -1.16
COL8A1-203ENST00000452013 PLPPR2Q96GM1 343 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 RBP7Q96R05 134 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 OSBPL10Q9BXB5 764 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 ULBP2Q9BZM5 246 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 TXNIPQ9H3M7 391 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 CRLF2Q9HC73 371 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 SLC17A5Q9NRA2 495 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 GLTPQ9NZD2 209 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 SLC25A15Q9Y619 301 aa7.8□□□□□ -1.16
COL8A1-203ENST00000452013 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.79□□□□□ -1.16
COL8A1-203ENST00000452013 UNC119BA6NIH7 251 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 A6NIZ1 184 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 TRIM64CA6NLI5 447 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 CYSRT1A8MQ03 144 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 H0YAE9 185 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 GNGT2O14610 69 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 PTP4A3O75365 173 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 TFAP2AP05549 437 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 CD3EP07766 207 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 FUT4P22083 530 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 MYF6P23409 242 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 PTAFRP25105 342 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 RPL4P36578 427 aaKnown RBP7.79□□□□□ -1.16
COL8A1-203ENST00000452013 MAGEA2P43356 314 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 GPR4P46093 362 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 OMPP47874 163 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 CLRN1P58418 232 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 RAP1BP61224 184 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 RPS4XP62701 263 aaKnown RBP7.79□□□□□ -1.16
COL8A1-203ENST00000452013 RAP1AP62834 184 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 LGALS3BPQ08380 585 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 GK3PQ14409 553 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 CEACAM16Q2WEN9 425 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 NCMAPQ5T1S8 102 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 FAM205BPQ63HN1 556 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 OR2T5Q6IEZ7 315 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 TMEM108Q6UXF1 575 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 ZER1Q7Z7L7 766 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 DEPDC4Q8N2C3 294 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 WDR31Q8NA23 367 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 TSPAN14Q8NG11 270 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 OR2T29Q8NH02 315 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 FNDC8Q8TC99 324 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 ASB10Q8WXI3 467 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 TMEM54Q969K7 222 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 FAM46AQ96IP4 442 aaKnown RBP7.79□□□□□ -1.16
COL8A1-203ENST00000452013 RADILQ96JH8 1075 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms