RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 CD82P27701 267 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 RPL29P47914 159 aaKnown RBP8.32□□□□□ -1.08
NIPBL-202ENST00000448238 RAB9AP51151 201 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 KIAA1024LP59773 190 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 CYP1B1Q16678 543 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 HIST3H3Q16695 136 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 HLA-BQ31612 363 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 PRRT3Q5FWE3 981 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 SIRPB2Q5JXA9 342 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 SLC22A24Q8N4F4 322 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 TMEM116Q8NCL8 245 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 OR52N2Q8NGI0 321 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 OR1L1Q8NH94 360 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 KLK6Q92876 244 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 DDOQ99489 341 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 SLC25A33Q9BSK2 321 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 RAB22AQ9UL26 194 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 BOKQ9UMX3 212 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-202ENST00000448238 PPP1R11O60927 126 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-202ENST00000448238 TMEM127O75204 238 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 SIX6O95475 246 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 LGI1O95970 557 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 ACTL6AO96019 429 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 RABGGTBP53611 331 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 WDR4P57081 412 aaKnown RBP8.32□□□□□ -1.08
NIPBL-202ENST00000448238 SDHAF4Q5VUM1 108 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 LCN8Q6JVE9 175 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 NPSR1Q6W5P4 371 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 FBXL16Q8N461 479 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 CELF5Q8N6W0 485 aaKnown RBP8.32□□□□□ -1.08
NIPBL-202ENST00000448238 NETO2Q8NC67 525 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 CREB3L4Q8TEY5 395 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 RARRES3Q9UL19 164 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 CTSAP10619 480 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 CD52P31358 61 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 JOSD1Q15040 202 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-202ENST00000448238 HENMT1Q5T8I9 393 aaKnown RBP8.32□□□□□ -1.08
NIPBL-202ENST00000448238 BPIFA4PQ86YQ2 179 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 DPH7Q9BTV6 452 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 GPR173Q9NS66 373 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 VIRMAQ69YN4 1812 aaKnown RBP8.32□□□□□ -1.08
NIPBL-202ENST00000448238 A0A087X0M5 115 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 A0A1B0GX30 115 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 UBE2Q2LH0YL09 131 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 SSTR4P31391 388 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 CDK5R2Q13319 367 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 PGGHGQ32M88 737 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 C9orf131Q5VYM1 1079 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 RANBP10Q6VN20 620 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 MFSD4AQ8N468 514 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 ARFGAP1Q8N6T3 406 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 CNEP1R1Q8N9A8 125 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 THAP3Q8WTV1 239 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-202ENST00000448238 PISDQ9UG56 409 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 OR52A4PA6NMU1 304 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 PRSS1P07477 247 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 LAMP1P11279 417 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 XCR1P46094 333 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 SQSTM1Q13501 440 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 GAB4Q2WGN9 574 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 WDR88Q6ZMY6 472 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF66Q6ZN08 573 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 LYSMD2Q8IV50 215 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 CPOQ8IVL8 374 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 OR5D13Q8NGL4 314 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 ESAMQ96AP7 390 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 MOGAT1Q96PD6 335 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 ANKRD63C9JTQ0 380 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 SYT5O00445 386 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 CDC123O75794 336 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-202ENST00000448238 SLC10A3P09131 477 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 LYPD4Q6UWN0 246 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 OSGIN1Q9UJX0 560 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 GPR52Q9Y2T5 361 aa8.32□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF816-ZNF321PA0A0X1KG74 233 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 F5H697 171 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 SLC6A11P48066 632 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 CIRBPQ14011 172 aaKnown RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 DOC2BQ14184 412 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 GRM2Q14416 872 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 PARP16Q8N5Y8 322 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ADPRHL1Q8NDY3 354 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 GPR32P1Q8NGA4 272 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 RPUSD4Q96CM3 377 aaKnown RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 SELENOIQ9C0D9 397 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 OR5V1Q9UGF6 321 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 STYXL1Q9Y6J8 313 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 A0A0G2JLW4 131 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 COX7A2P2O60397 106 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 WDR1O75083 606 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 DHRS3O75911 302 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 BMP2P12643 396 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 MMP11P24347 488 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 HTR1DP28221 377 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 BLVRBP30043 206 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 C21orf58P58505 322 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 PMS2P11Q13670 270 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ABI3BPQ7Z7G0 1075 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 C19orf47Q8N9M1 422 aaKnown RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 SLC26A10Q8NG04 563 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms